RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 PTX4Q96A99 478 aa16.42■□□□□ 0.22
SCARB1-210ENST00000545493 UBE2E2Q96LR5 201 aa16.42■□□□□ 0.22
SCARB1-210ENST00000545493 B9D2Q9BPU9 175 aa16.42■□□□□ 0.22
SCARB1-210ENST00000545493 CMSS1Q9BQ75 279 aaKnown RBP16.42■□□□□ 0.22
SCARB1-210ENST00000545493 VCX3BQ9H321 246 aa16.42■□□□□ 0.22
SCARB1-210ENST00000545493 ACOT13Q9NPJ3 140 aa16.42■□□□□ 0.22
SCARB1-210ENST00000545493 WASHC3Q9Y3C0 194 aa16.42■□□□□ 0.22
SCARB1-210ENST00000545493 V9GY05 133 aa16.42■□□□□ 0.22
SCARB1-210ENST00000545493 DNAH7Q8WXX0 4024 aa16.42■□□□□ 0.22
SCARB1-210ENST00000545493 SEC14L6B5MCN3 397 aa16.41■□□□□ 0.22
SCARB1-210ENST00000545493 HSPA12AO43301 675 aa16.41■□□□□ 0.22
SCARB1-210ENST00000545493 OR10A3P58181 314 aa16.41■□□□□ 0.22
SCARB1-210ENST00000545493 RUNX1Q01196 453 aa16.41■□□□□ 0.22
SCARB1-210ENST00000545493 C9orf66Q5T8R8 295 aa16.41■□□□□ 0.22
SCARB1-210ENST00000545493 OR5B12Q96R08 314 aa16.41■□□□□ 0.22
SCARB1-210ENST00000545493 NDUFB11Q9NX14 153 aa16.41■□□□□ 0.22
SCARB1-210ENST00000545493 VSIG4Q9Y279 399 aa16.41■□□□□ 0.22
SCARB1-210ENST00000545493 KCNK7Q9Y2U2 307 aa16.41■□□□□ 0.22
SCARB1-210ENST00000545493 DENRO43583 198 aaKnown RBP16.4■□□□□ 0.22
SCARB1-210ENST00000545493 RBBP9O75884 186 aa16.4■□□□□ 0.22
SCARB1-210ENST00000545493 HSPA13P48723 471 aa16.4■□□□□ 0.22
SCARB1-210ENST00000545493 LINC00205P59089 165 aa16.4■□□□□ 0.22
SCARB1-210ENST00000545493 PRR25Q96S07 402 aa16.4■□□□□ 0.22
SCARB1-210ENST00000545493 GHITMQ9H3K2 345 aa16.4■□□□□ 0.22
SCARB1-210ENST00000545493 SCOCQ9UIL1 159 aa16.4■□□□□ 0.22
SCARB1-210ENST00000545493 GAB2Q9UQC2 676 aa16.4■□□□□ 0.22
SCARB1-210ENST00000545493 A0A1W2PN81 502 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 H7C2Y5 167 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 FCN1O00602 326 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 IGKV1-16P04430 117 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 EGR2P11161 476 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-210ENST00000545493 CHRNA7P36544 502 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 RAB9AP51151 201 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 CX3CL1P78423 397 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 CD69Q07108 199 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 PLGLAQ15195 96 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 VAX1Q5SQQ9 334 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 ZNF660Q6AZW8 331 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-210ENST00000545493 TMEM65Q6PI78 240 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 CD200R1LQ6Q8B3 271 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 ZNF383Q8NA42 475 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 DRAXINQ8NBI3 349 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-210ENST00000545493 CASTOR1Q8WTX7 329 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 CABLES2Q9BTV7 478 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 ALX4Q9H161 411 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-210ENST00000545493 RDH8Q9NYR8 311 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 BLOC1S6Q9UL45 172 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 RNF150Q9ULK6 438 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 A3GALT2U3KPV4 340 aa16.39■□□□□ 0.21
SCARB1-210ENST00000545493 TRDCB7Z8K6 153 aa16.38■□□□□ 0.21
SCARB1-210ENST00000545493 MFNGO00587 321 aa16.38■□□□□ 0.21
SCARB1-210ENST00000545493 RAMP3O60896 148 aa16.38■□□□□ 0.21
SCARB1-210ENST00000545493 FCGR3AP08637 254 aa16.38■□□□□ 0.21
SCARB1-210ENST00000545493 GSTP1P09211 210 aaKnown RBP16.38■□□□□ 0.21
SCARB1-210ENST00000545493 OR8U8P0C7N1 319 aa16.38■□□□□ 0.21
SCARB1-210ENST00000545493 MC5RP33032 325 aa16.38■□□□□ 0.21
SCARB1-210ENST00000545493 PSG5Q15238 335 aa16.38■□□□□ 0.21
SCARB1-210ENST00000545493 OR1N2Q8NGR9 330 aa16.38■□□□□ 0.21
SCARB1-210ENST00000545493 C5orf30Q96GV9 206 aa16.38■□□□□ 0.21
SCARB1-210ENST00000545493 FAM103A1Q9BTL3 118 aaKnown RBP16.38■□□□□ 0.21
SCARB1-210ENST00000545493 TOLLIPQ9H0E2 274 aa16.38■□□□□ 0.21
SCARB1-210ENST00000545493 TPSG1Q9NRR2 321 aa16.38■□□□□ 0.21
SCARB1-210ENST00000545493 ZMAT5Q9UDW3 170 aaKnown RBP16.38■□□□□ 0.21
SCARB1-210ENST00000545493 RAB22AQ9UL26 194 aa16.38■□□□□ 0.21
SCARB1-210ENST00000545493 FOXA2Q9Y261 457 aaPredicted RBP16.38■□□□□ 0.21
SCARB1-210ENST00000545493 A0A0B4J203 849 aa16.37■□□□□ 0.21
SCARB1-210ENST00000545493 TRAV1-2A0A0B4J238 106 aa16.37■□□□□ 0.21
SCARB1-210ENST00000545493 FABP7O15540 132 aa16.37■□□□□ 0.21
SCARB1-210ENST00000545493 SPDEFO95238 335 aa16.37■□□□□ 0.21
SCARB1-210ENST00000545493 CA2P00918 260 aa16.37■□□□□ 0.21
SCARB1-210ENST00000545493 CD3GP09693 182 aa16.37■□□□□ 0.21
SCARB1-210ENST00000545493 ZNF616Q08AN1 781 aa16.37■□□□□ 0.21
SCARB1-210ENST00000545493 TCTEX1D1Q8N7M0 179 aa16.37■□□□□ 0.21
SCARB1-210ENST00000545493 OR4A4PQ8NGN8 299 aa16.37■□□□□ 0.21
SCARB1-210ENST00000545493 METTL1Q9UBP6 276 aaKnown RBP16.37■□□□□ 0.21
SCARB1-210ENST00000545493 ERICH4A6NGS2 130 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 PDCD5O14737 125 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 TFAP2AP05549 437 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 GNB3P16520 340 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 PSMD7P51665 324 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 DCTN2Q13561 401 aaKnown RBP16.36■□□□□ 0.21
SCARB1-210ENST00000545493 ZNF260Q3ZCT1 412 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 NR2C2APQ86WQ0 139 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 PDPNQ86YL7 162 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 ABHD5Q8WTS1 349 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 MAFIPQ8WZ33 124 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 RAB3CQ96E17 227 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 CLCC1Q96S66 551 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 RNF5Q99942 180 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 RAB26Q9ULW5 256 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 LSM4Q9Y4Z0 139 aaKnown RBP16.36■□□□□ 0.21
SCARB1-210ENST00000545493 NUBP2Q9Y5Y2 271 aa16.36■□□□□ 0.21
SCARB1-210ENST00000545493 TRDV1A0A1B0GX56 115 aa16.35■□□□□ 0.21
SCARB1-210ENST00000545493 IFITM5A6NNB3 132 aa16.35■□□□□ 0.21
SCARB1-210ENST00000545493 M0R1X1 148 aa16.35■□□□□ 0.21
SCARB1-210ENST00000545493 RAB27BO00194 218 aa16.35■□□□□ 0.21
SCARB1-210ENST00000545493 MYL9P24844 172 aa16.35■□□□□ 0.21
SCARB1-210ENST00000545493 ECI1P42126 302 aa16.35■□□□□ 0.21
SCARB1-210ENST00000545493 GABARAPL2P60520 117 aa16.35■□□□□ 0.21
SCARB1-210ENST00000545493 SSBP2P81877 361 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms