RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 GPR61Q9BZJ8 451 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 RDH8Q9NYR8 311 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 OR1A1Q9P1Q5 309 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 GAB2Q9UQC2 676 aa9.32□□□□□ -0.92
HDAC4-216ENST00000544989 TRBV6-7A0A0A0MS04 114 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 A0A0B4J203 849 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 H0YJW9 148 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 H7C2Y5 167 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 BET1O15155 118 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 NDUFA3O95167 84 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 SPDEFO95238 335 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 TFAP2AP05549 437 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 CT45A6P0DMU7 189 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 CT45A5P0DMU8 189 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 CT45A7P0DMV0 189 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 GNG2P59768 71 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 CBX3Q13185 183 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 C5orf64Q2M2E5 130 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 RPL39P5Q59GN2 51 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 FAM131AQ6UXB0 335 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 REC114Q7Z4M0 266 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 C5orf24Q7Z6I8 188 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 WFDC9Q8NEX5 89 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 ABHD14BQ96IU4 210 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 TSNAXQ99598 290 aaKnown RBP9.31□□□□□ -0.92
HDAC4-216ENST00000544989 RHBDL2Q9NX52 303 aa9.31□□□□□ -0.92
HDAC4-216ENST00000544989 RBM7Q9Y580 266 aaKnown RBP9.31□□□□□ -0.92
HDAC4-216ENST00000544989 IGKV1-6A0A0C4DH72 117 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 PLXNB1O43157 2135 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 AIREO43918 545 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 SLC22A5O76082 557 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 GSTT2P0CG29 244 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 GSTT2BP0CG30 244 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 RRASP10301 218 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 MXD1Q05195 221 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 PLGLAQ15195 96 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 KPRPQ5T749 579 aaPredicted RBP9.3□□□□□ -0.92
HDAC4-216ENST00000544989 SAMD5Q5TGI4 173 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 ZNF660Q6AZW8 331 aaPredicted RBP9.3□□□□□ -0.92
HDAC4-216ENST00000544989 LIN54Q6MZP7 749 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 PDPNQ86YL7 162 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 RNF152Q8N8N0 203 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 LGALS14Q8TCE9 139 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 RCC1LQ96I51 464 aaKnown RBP9.3□□□□□ -0.92
HDAC4-216ENST00000544989 ADTRPQ96IZ2 230 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 OR51J1Q9H342 316 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 DIABLOQ9NR28 239 aa9.3□□□□□ -0.92
HDAC4-216ENST00000544989 SMIM30A4D0T7 59 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 NUDT19A8MXV4 375 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 RRHO14718 337 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 IGHG4P01861 327 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 SNRPBP14678 240 aaKnown RBP9.29□□□□□ -0.92
HDAC4-216ENST00000544989 MYCNOSP40205 109 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 TMEM267Q0VDI3 215 aaPredicted RBP9.29□□□□□ -0.92
HDAC4-216ENST00000544989 IGSF11Q5DX21 431 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 IDNKQ5T6J7 187 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 HIST2H2BDQ6DRA6 164 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 C10orf99Q6UWK7 81 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 ZNF695Q8IW36 515 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 TCTEX1D1Q8N7M0 179 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 HSPB9Q9BQS6 159 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 MCRIP2Q9BUT9 160 aaKnown RBP9.29□□□□□ -0.92
HDAC4-216ENST00000544989 PARP12Q9H0J9 701 aaKnown RBP9.29□□□□□ -0.92
HDAC4-216ENST00000544989 OR2D2Q9H210 308 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 LINC00527Q9UJ94 153 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 RNF150Q9ULK6 438 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 SPATA2Q9UM82 520 aa9.29□□□□□ -0.92
HDAC4-216ENST00000544989 TMEM235A6NFC5 223 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 LINC01548A6NM66 108 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 M0R1X1 148 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 OR8U9P0C7N5 309 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 CBX5P45973 191 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 CDX1P47902 265 aaPredicted RBP9.28□□□□□ -0.92
HDAC4-216ENST00000544989 LGALS7P47929 136 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 THBS3P49746 956 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 RPS16P62249 146 aaKnown RBP9.28□□□□□ -0.92
HDAC4-216ENST00000544989 CFHR3Q02985 330 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 RTL8BQ17RB0 113 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 BEAN1Q3B7T3 259 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 ZNF260Q3ZCT1 412 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 CNIH2Q6PI25 160 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 TMEM65Q6PI78 240 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 H1FOOQ8IZA3 346 aaPredicted RBP9.28□□□□□ -0.92
HDAC4-216ENST00000544989 KLHL30-AS1Q8NEE0 82 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 OR8U1Q8NH10 309 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 FLYWCH2Q96CP2 140 aaKnown RBP9.28□□□□□ -0.92
HDAC4-216ENST00000544989 ST6GALNAC5Q9BVH7 336 aa9.28□□□□□ -0.92
HDAC4-216ENST00000544989 ZMAT5Q9UDW3 170 aaKnown RBP9.28□□□□□ -0.92
HDAC4-216ENST00000544989 ZNF230Q9UIE0 474 aaPredicted RBP9.28□□□□□ -0.92
HDAC4-216ENST00000544989 IGHV7-81A0A0B4J1V7 117 aa9.27□□□□□ -0.93
HDAC4-216ENST00000544989 TRIM64CA6NLI5 447 aa9.27□□□□□ -0.93
HDAC4-216ENST00000544989 G3V4G9 280 aa9.27□□□□□ -0.93
HDAC4-216ENST00000544989 CRIP2P52943 208 aaPredicted RBP9.27□□□□□ -0.93
HDAC4-216ENST00000544989 PYHIN1Q6K0P9 492 aa9.27□□□□□ -0.93
HDAC4-216ENST00000544989 GLDNQ6ZMI3 551 aaPredicted RBP9.27□□□□□ -0.93
HDAC4-216ENST00000544989 ZNF383Q8NA42 475 aa9.27□□□□□ -0.93
HDAC4-216ENST00000544989 MAFIPQ8WZ33 124 aa9.27□□□□□ -0.93
HDAC4-216ENST00000544989 DPF1Q92782 380 aa9.27□□□□□ -0.93
HDAC4-216ENST00000544989 KCTD12Q96CX2 325 aaKnown RBP9.27□□□□□ -0.93
HDAC4-216ENST00000544989 YIPF6Q96EC8 236 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms