RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 GSX2Q9BZM3 304 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 UBR5O95071 2799 aaPredicted RBP11.29□□□□□ -0.6
HCFC2-202ENST00000544223 TENM4Q6N022 2769 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 LEUTXA8MZ59 168 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 B9A039 149 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 DVL1O14640 695 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 NMBP08949 121 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 SFTPCP11686 197 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 MUC1P15941 1255 aaPredicted RBP11.29□□□□□ -0.6
HCFC2-202ENST00000544223 GZMHP20718 246 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 CT45A1Q5HYN5 189 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 TMEM217Q8N7C4 229 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 CT45A3Q8NHU0 189 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 MS4A5Q9H3V2 200 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 WFDC1Q9HC57 220 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 FBXL17Q9UF56 701 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 VSTM5A8MXK1 200 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 CHST1O43916 411 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 FBXO24O75426 580 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 CST7O76096 145 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 CLDN1O95832 211 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 CGB3P0DN86 165 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 CGB7P0DN87 165 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 IAPPP10997 89 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 LYL1P12980 280 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 VDAC1P21796 283 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 CDKN1AP38936 164 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 NKX2-1P43699 371 aaPredicted RBP11.28□□□□□ -0.6
HCFC2-202ENST00000544223 GPR12P47775 334 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 RPL31P62899 125 aaKnown RBP11.28□□□□□ -0.6
HCFC2-202ENST00000544223 SMCO1Q147U7 214 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 FAM209AQ5JX71 171 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 PPP1R35Q8TAP8 253 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 TNCP24821 2201 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 TRGV10A0A0A0MS01 117 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 TRAV38-1A0A0B4J264 116 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 ANKRD34BA5PLL1 514 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 KIAA1324LA8MWY0 1029 aaPredicted RBP11.28□□□□□ -0.6
HCFC2-202ENST00000544223 LGALS8O00214 317 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 WRBO00258 174 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 ST8SIA3O43173 380 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 ADH4P08319 380 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 S100GP29377 79 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 EIF4EBP1Q13541 118 aaPredicted RBP11.28□□□□□ -0.6
HCFC2-202ENST00000544223 CLINT1Q14677 625 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 AQP10Q96PS8 301 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 IFI27L2Q9H2X8 130 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 CLN8Q9UBY8 286 aa11.28□□□□□ -0.6
HCFC2-202ENST00000544223 M0R1X1 148 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 F12P00748 615 aaPredicted RBP11.27□□□□□ -0.61
HCFC2-202ENST00000544223 C4BPBP20851 252 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 TMEM200BQ69YZ2 307 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 PLEKHF2Q9H8W4 249 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 IGSF23A1L1A6 192 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 FCGR3BO75015 233 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 PET100P0DJ07 73 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 NUP62P37198 522 aaPredicted RBP11.27□□□□□ -0.61
HCFC2-202ENST00000544223 HTD2P86397 168 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 HFEQ30201 348 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 THOC7Q6I9Y2 204 aaKnown RBP11.27□□□□□ -0.61
HCFC2-202ENST00000544223 COMMD7Q86VX2 200 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 ODF3L1Q8IXM7 274 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 ZNF295-AS1Q8N0V1 137 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 LYG1Q8N1E2 194 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 SCARB1Q8WTV0 552 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 DIRC2Q96SL1 478 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 OR6C3Q9NZP0 311 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 ZANQ9Y493 2812 aa11.27□□□□□ -0.61
HCFC2-202ENST00000544223 ABCA12Q86UK0 2595 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 PLXNB1O43157 2135 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 B3GALNT1O75752 331 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 REG1BP48304 166 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 RAB14P61106 215 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 DIAPH2-AS1Q14236 149 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 HNF4GQ14541 408 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 EFNB3Q15768 340 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 IGFBPL1Q8WX77 278 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 AKR1E2Q96JD6 320 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 LIN7CQ9NUP9 197 aaKnown RBP11.26□□□□□ -0.61
HCFC2-202ENST00000544223 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 POMT1Q9Y6A1 747 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 TET2Q6N021 2002 aaPredicted RBP11.26□□□□□ -0.61
HCFC2-202ENST00000544223 SAA2-SAA4A0A096LPE2 208 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 SAA2P0DJI9 122 aaPredicted RBP11.26□□□□□ -0.61
HCFC2-202ENST00000544223 SRPXP78539 464 aa11.26□□□□□ -0.61
HCFC2-202ENST00000544223 TMEM267Q0VDI3 215 aaPredicted RBP11.26□□□□□ -0.61
HCFC2-202ENST00000544223 NKX6-3A6NJ46 265 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 F2RL2O00254 374 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 PAX5Q02548 391 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 C4orf17Q53FE4 359 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 CLLU1Q5K131 121 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 C1orf87Q8N0U7 546 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 ABHD14AQ9BUJ0 271 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 SH3BGRL3Q9H299 93 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 UBTD1Q9HAC8 227 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 E5RGE8 158 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 DUTP33316 252 aaKnown RBP11.25□□□□□ -0.61
HCFC2-202ENST00000544223 PAX9P55771 341 aa11.25□□□□□ -0.61
HCFC2-202ENST00000544223 OR2B8PP59922 312 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms