RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 TOMM5Q8N4H5 51 aa11.65□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TMEM86BQ8N661 226 aa11.65□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ZNF645Q8N7E2 425 aa11.65□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-216ENST00000543995 CAPSLQ8WWF8 208 aa11.65□□□□□ -0.54
TNFRSF1A-216ENST00000543995 AKIP1Q9NQ31 210 aa11.65□□□□□ -0.54
TNFRSF1A-216ENST00000543995 SDHAF2Q9NX18 166 aa11.65□□□□□ -0.54
TNFRSF1A-216ENST00000543995 IGHV3-72A0A0B4J1Y9 119 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 ANKRD20A5PA0PJZ0 165 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 TRIM77I1YAP6 450 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 M0R1X1 148 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CD74P04233 296 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 AP3S2P59780 193 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 SRSF2Q01130 221 aaKnown RBP11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 MEF2DQ14814 521 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 TRIQKQ629K1 86 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 ZNF660Q6AZW8 331 aaPredicted RBP11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 PRIMA1Q86XR5 153 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 OR4D10Q8NGI6 311 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 ZNF251Q9BRH9 671 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 MRPL20Q9BYC9 149 aaKnown RBP11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CHIAQ9BZP6 476 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 SLC5A7Q9GZV3 580 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 VPREB3Q9UKI3 123 aa11.65□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CLDN34H7C241 214 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 SLC22A5O76082 557 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 IGKV1D-33P01593 117 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 IGKV1-33P01594 117 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 AMY2AP04746 511 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 FAM106CPP0CH98 169 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 UBA52P62987 128 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 HES1Q14469 280 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 BAK1Q16611 211 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 SCGB2B2Q4G0G5 96 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 ZNF57Q68EA5 555 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 FAAP20Q6NZ36 180 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 MFSD4AQ8N468 514 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 ARRDC1Q8N5I2 433 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 DRAXINQ8NBI3 349 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 PIFOQ8TCI5 191 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CFHR4Q92496 578 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 TRIM63Q969Q1 353 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 MOB3AQ96BX8 217 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 NABP2Q9BQ15 211 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 MCUBQ9NWR8 336 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 PITPNC1Q9UKF7 332 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 GAB2Q9UQC2 676 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 TCF19Q9Y242 345 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 MXRA5Q9NR99 2828 aa11.64□□□□□ -0.55
TNFRSF1A-216ENST00000543995 DISC1C4P0D8 188 aa11.63□□□□□ -0.55
TNFRSF1A-216ENST00000543995 SNRNP70P08621 437 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CT45A6P0DMU7 189 aa11.63□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CT45A5P0DMU8 189 aa11.63□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CT45A7P0DMV0 189 aa11.63□□□□□ -0.55
TNFRSF1A-216ENST00000543995 LSAMPQ13449 338 aa11.63□□□□□ -0.55
TNFRSF1A-216ENST00000543995 GLDNQ6ZMI3 551 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-216ENST00000543995 OR4C16Q8NGL9 310 aa11.63□□□□□ -0.55
TNFRSF1A-216ENST00000543995 SDHCQ99643 169 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CCL28Q9NRJ3 127 aa11.63□□□□□ -0.55
TNFRSF1A-216ENST00000543995 PROP1O75360 226 aa11.62□□□□□ -0.55
TNFRSF1A-216ENST00000543995 RNASE1P07998 156 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CD1BP29016 333 aa11.62□□□□□ -0.55
TNFRSF1A-216ENST00000543995 FAUP35544 74 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-216ENST00000543995 HABP2Q14520 560 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF1A-216ENST00000543995 C16orf87Q6PH81 154 aa11.62□□□□□ -0.55
TNFRSF1A-216ENST00000543995 TMEM219Q86XT9 240 aa11.62□□□□□ -0.55
TNFRSF1A-216ENST00000543995 BORCS5Q969J3 196 aa11.62□□□□□ -0.55
TNFRSF1A-216ENST00000543995 C5orf30Q96GV9 206 aa11.62□□□□□ -0.55
TNFRSF1A-216ENST00000543995 WDR12Q9GZL7 423 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-216ENST00000543995 FXYD6Q9H0Q3 95 aa11.62□□□□□ -0.55
TNFRSF1A-216ENST00000543995 OR5H14A6NHG9 310 aa11.61□□□□□ -0.55
TNFRSF1A-216ENST00000543995 FAM90A9PA6NNJ1 464 aa11.61□□□□□ -0.55
TNFRSF1A-216ENST00000543995 H7C2Y5 167 aa11.61□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CRYBA1P05813 215 aa11.61□□□□□ -0.55
TNFRSF1A-216ENST00000543995 TMEM11P17152 192 aa11.61□□□□□ -0.55
TNFRSF1A-216ENST00000543995 LINC00205P59089 165 aa11.61□□□□□ -0.55
TNFRSF1A-216ENST00000543995 KLF9Q13886 244 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1A-216ENST00000543995 HNF4GQ14541 408 aa11.61□□□□□ -0.55
TNFRSF1A-216ENST00000543995 LIAT1Q6ZQX7 453 aa11.61□□□□□ -0.55
TNFRSF1A-216ENST00000543995 THNSL2Q86YJ6 484 aa11.61□□□□□ -0.55
TNFRSF1A-216ENST00000543995 OR2T10Q8NGZ9 312 aa11.61□□□□□ -0.55
TNFRSF1A-216ENST00000543995 PRRT1Q99946 306 aa11.61□□□□□ -0.55
TNFRSF1A-216ENST00000543995 A6NDX4 124 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 TNFSF12O43508 249 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 GPR137BO60478 399 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 IGLV2-14P01704 120 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 APOA2P02652 100 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 ZNF735P0CB33 412 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 IL7P13232 177 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 PGAM2P15259 253 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 MC5RP33032 325 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 THBS3P49746 956 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 PPP5CP53041 499 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 RIPPLY3P57055 190 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 ZNF846Q147U1 533 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 AADACL3Q5VUY0 350 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 LPCAT3Q6P1A2 487 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CCBE1Q6UXH8 406 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 ZNF818PQ6ZRF7 136 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 ZNF383Q8NA42 475 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms