RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 TCTEX1D2Q8WW35 142 aa16.33■□□□□ 0.21
COPS7A-218ENST00000543939 H1FXQ92522 213 aaKnown RBP16.33■□□□□ 0.21
COPS7A-218ENST00000543939 LEAP2Q969E1 77 aa16.33■□□□□ 0.21
COPS7A-218ENST00000543939 A0A1B0GU03 582 aa16.33■□□□□ 0.2
COPS7A-218ENST00000543939 LINC00473A8K010 186 aa16.33■□□□□ 0.2
COPS7A-218ENST00000543939 C17orf98A8MV24 154 aa16.33■□□□□ 0.2
COPS7A-218ENST00000543939 IGKV1-5P01602 117 aa16.33■□□□□ 0.2
COPS7A-218ENST00000543939 NFYBP25208 207 aa16.33■□□□□ 0.2
COPS7A-218ENST00000543939 HTR2BP41595 481 aa16.33■□□□□ 0.2
COPS7A-218ENST00000543939 ZNF843Q8N446 348 aa16.33■□□□□ 0.2
COPS7A-218ENST00000543939 ZNF714Q96N38 554 aa16.33■□□□□ 0.2
COPS7A-218ENST00000543939 UBQLN2Q9UHD9 624 aa16.33■□□□□ 0.2
COPS7A-218ENST00000543939 LAMP3Q9UQV4 416 aa16.33■□□□□ 0.2
COPS7A-218ENST00000543939 DOCK11Q5JSL3 2073 aa16.33■□□□□ 0.2
COPS7A-218ENST00000543939 E5RGE8 158 aa16.32■□□□□ 0.2
COPS7A-218ENST00000543939 RAMP3O60896 148 aa16.32■□□□□ 0.2
COPS7A-218ENST00000543939 PITX3O75364 302 aa16.32■□□□□ 0.2
COPS7A-218ENST00000543939 LY6HO94772 140 aa16.32■□□□□ 0.2
COPS7A-218ENST00000543939 HKR1P10072 659 aa16.32■□□□□ 0.2
COPS7A-218ENST00000543939 CCL3L1P16619 93 aa16.32■□□□□ 0.2
COPS7A-218ENST00000543939 DUTP33316 252 aaKnown RBP16.32■□□□□ 0.2
COPS7A-218ENST00000543939 NKX2-1P43699 371 aaPredicted RBP16.32■□□□□ 0.2
COPS7A-218ENST00000543939 SPAG16Q8N0X2 631 aa16.32■□□□□ 0.2
COPS7A-218ENST00000543939 DMBX1Q8NFW5 382 aa16.32■□□□□ 0.2
COPS7A-218ENST00000543939 ARPC5LQ9BPX5 153 aa16.32■□□□□ 0.2
COPS7A-218ENST00000543939 RCL1Q9Y2P8 373 aaKnown RBP16.32■□□□□ 0.2
COPS7A-218ENST00000543939 NSG2Q9Y328 171 aa16.32■□□□□ 0.2
COPS7A-218ENST00000543939 OR2B11Q5JQS5 317 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 HEPN1Q6WQI6 88 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 SLC7A5P1Q8MH63 180 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 C11orf1Q9H5F2 150 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 UBTD1Q9HAC8 227 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 A0A1W2PPE3 182 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 DAOP14920 347 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 EPHA1P21709 976 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 AKR1C2P52895 323 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 LINC00205P59089 165 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 UBA52P62987 128 aaKnown RBP16.31■□□□□ 0.2
COPS7A-218ENST00000543939 ID3Q02535 119 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 RPL39P5Q59GN2 51 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 CXorf66Q5JRM2 361 aaPredicted RBP16.31■□□□□ 0.2
COPS7A-218ENST00000543939 AVPI1Q5T686 147 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 ZNF841Q6ZN19 808 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 Q6ZRM9 215 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.31■□□□□ 0.2
COPS7A-218ENST00000543939 RNASE11Q8TAA1 199 aaKnown RBP16.31■□□□□ 0.2
COPS7A-218ENST00000543939 PLEKHA2Q9HB19 425 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 ITGB1BP2Q9UKP3 347 aa16.31■□□□□ 0.2
COPS7A-218ENST00000543939 M0R1X1 148 aa16.3■□□□□ 0.2
COPS7A-218ENST00000543939 RPL12P30050 165 aaKnown RBP16.3■□□□□ 0.2
COPS7A-218ENST00000543939 DLX6P56179 175 aa16.3■□□□□ 0.2
COPS7A-218ENST00000543939 ERVFRD-1P60508 538 aa16.3■□□□□ 0.2
COPS7A-218ENST00000543939 NCR3LG1Q68D85 454 aa16.3■□□□□ 0.2
COPS7A-218ENST00000543939 ODF3L1Q8IXM7 274 aa16.3■□□□□ 0.2
COPS7A-218ENST00000543939 ST8SIA2Q92186 375 aa16.3■□□□□ 0.2
COPS7A-218ENST00000543939 LRBAP50851 2863 aa16.29■□□□□ 0.2
COPS7A-218ENST00000543939 TRBV23-1A0A0A0MS06 115 aa16.29■□□□□ 0.2
COPS7A-218ENST00000543939 C1QL1O75973 258 aa16.29■□□□□ 0.2
COPS7A-218ENST00000543939 SPDEFO95238 335 aa16.29■□□□□ 0.2
COPS7A-218ENST00000543939 P2RY1P47900 373 aa16.29■□□□□ 0.2
COPS7A-218ENST00000543939 POLR2GP62487 172 aaKnown RBP eCLIP16.29■□□□□ 0.2
COPS7A-218ENST00000543939 ZNF816Q0VGE8 651 aaPredicted RBP16.29■□□□□ 0.2
COPS7A-218ENST00000543939 IZUMO4Q1ZYL8 232 aa16.29■□□□□ 0.2
COPS7A-218ENST00000543939 TMEM155Q4W5P6 130 aa16.29■□□□□ 0.2
COPS7A-218ENST00000543939 C1orf229Q6ZS94 237 aaPredicted RBP16.29■□□□□ 0.2
COPS7A-218ENST00000543939 SLC25A48Q6ZT89 311 aaKnown RBP16.29■□□□□ 0.2
COPS7A-218ENST00000543939 OR8H3Q8N146 312 aa16.29■□□□□ 0.2
COPS7A-218ENST00000543939 ZNF471Q9BX82 626 aaPredicted RBP16.29■□□□□ 0.2
COPS7A-218ENST00000543939 CYTL1Q9NRR1 136 aa16.29■□□□□ 0.2
COPS7A-218ENST00000543939 F5H0A9 414 aaPredicted RBP16.28■□□□□ 0.2
COPS7A-218ENST00000543939 RAB29O14966 203 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 S1PR2O95136 353 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 P0C879 139 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 RNF224P0DH78 156 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 GNG10P50151 68 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 CD300LFQ8TDQ1 290 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 RAB1CQ92928 201 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 TIMD4Q96H15 378 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 ZNF251Q9BRH9 671 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 CACNG5Q9UF02 275 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 RALYQ9UKM9 306 aaKnown RBP16.28■□□□□ 0.2
COPS7A-218ENST00000543939 MMP24Q9Y5R2 645 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 SAA2-SAA4A0A096LPE2 208 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 KIAA1324LA8MWY0 1029 aaPredicted RBP16.28■□□□□ 0.2
COPS7A-218ENST00000543939 GOSR1O95249 250 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 SAA2P0DJI9 122 aaPredicted RBP16.28■□□□□ 0.2
COPS7A-218ENST00000543939 ALKAL2Q6UX46 152 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 SCARB1Q8WTV0 552 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 CHODLQ9H9P2 273 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 MIOXQ9UGB7 285 aa16.28■□□□□ 0.2
COPS7A-218ENST00000543939 RPS10-NUDT3A0A1W2PQS6 291 aa16.27■□□□□ 0.19
COPS7A-218ENST00000543939 GPR37O15354 613 aa16.27■□□□□ 0.19
COPS7A-218ENST00000543939 PPIHO43447 177 aaKnown RBP16.27■□□□□ 0.19
COPS7A-218ENST00000543939 ATG12O94817 140 aa16.27■□□□□ 0.19
COPS7A-218ENST00000543939 CDKN1AP38936 164 aa16.27■□□□□ 0.19
COPS7A-218ENST00000543939 LYG1Q8N1E2 194 aa16.27■□□□□ 0.19
COPS7A-218ENST00000543939 STOML3Q8TAV4 291 aa16.27■□□□□ 0.19
COPS7A-218ENST00000543939 MAGT1Q9H0U3 335 aa16.27■□□□□ 0.19
COPS7A-218ENST00000543939 RBFOX2O43251 390 aaKnown RBP eCLIP16.26■□□□□ 0.191e-7■■□□□ 11.6
COPS7A-218ENST00000543939 GPR137BO60478 399 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms