RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 OR51S1Q8NGJ8 323 aa16.76■□□□□ 0.27
OTUB1-211ENST00000543004 MRPL20Q9BYC9 149 aaKnown RBP16.76■□□□□ 0.27
OTUB1-211ENST00000543004 IGHV3-72A0A0B4J1Y9 119 aa16.75■□□□□ 0.27
OTUB1-211ENST00000543004 IGHV1-3A0A0C4DH29 117 aa16.75■□□□□ 0.27
OTUB1-211ENST00000543004 GAPDHP04406 335 aaKnown RBP16.75■□□□□ 0.27
OTUB1-211ENST00000543004 ZNF816Q0VGE8 651 aaPredicted RBP16.75■□□□□ 0.27
OTUB1-211ENST00000543004 BAMBIQ13145 260 aa16.75■□□□□ 0.27
OTUB1-211ENST00000543004 GLDNQ6ZMI3 551 aaPredicted RBP16.75■□□□□ 0.27
OTUB1-211ENST00000543004 TGIF2LXQ8IUE1 241 aa16.75■□□□□ 0.27
OTUB1-211ENST00000543004 DRAM1Q8N682 238 aa16.75■□□□□ 0.27
OTUB1-211ENST00000543004 ZDHHC16Q969W1 377 aa16.75■□□□□ 0.27
OTUB1-211ENST00000543004 DUX5Q96PT3 197 aa16.75■□□□□ 0.27
OTUB1-211ENST00000543004 SLC5A7Q9GZV3 580 aa16.75■□□□□ 0.27
OTUB1-211ENST00000543004 TNFRSF19Q9NS68 423 aa16.75■□□□□ 0.27
OTUB1-211ENST00000543004 TIMM23O14925 209 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 IGHV4-59P01825 116 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 AP3S2P59780 193 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 Q6YL49 198 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 ZNF645Q8N7E2 425 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 PIFOQ8TCI5 191 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 TSC22D3Q99576 134 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 SSX3Q99909 188 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 PRDM13Q9H4Q3 707 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 DISC1C4P0D8 188 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 M0R1X1 148 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 PLA2G10O15496 165 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 HOXA3O43365 443 aaPredicted RBP16.74■□□□□ 0.27
OTUB1-211ENST00000543004 CT45A6P0DMU7 189 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 CT45A5P0DMU8 189 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 CT45A7P0DMV0 189 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 GNRHRP30968 328 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 ZNF818PQ6ZRF7 136 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 MOB3BQ86TA1 216 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 OR13C8Q8NGS7 320 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 CFHR4Q92496 578 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 S1PR3Q99500 378 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 ESM1Q9NQ30 184 aa16.74■□□□□ 0.27
OTUB1-211ENST00000543004 TNFSF12O43508 249 aa16.73■□□□□ 0.27
OTUB1-211ENST00000543004 UPK1BO75841 260 aa16.73■□□□□ 0.27
OTUB1-211ENST00000543004 TERB2Q8NHR7 220 aa16.73■□□□□ 0.27
OTUB1-211ENST00000543004 NABP2Q9BQ15 211 aa16.73■□□□□ 0.27
OTUB1-211ENST00000543004 H3BUX3 64 aa16.72■□□□□ 0.27
OTUB1-211ENST00000543004 PI3P19957 117 aa16.72■□□□□ 0.27
OTUB1-211ENST00000543004 IER3P46695 156 aa16.72■□□□□ 0.27
OTUB1-211ENST00000543004 IDO2Q6ZQW0 420 aa16.72■□□□□ 0.27
OTUB1-211ENST00000543004 MARCH1Q8TCQ1 289 aa16.72■□□□□ 0.27
OTUB1-211ENST00000543004 GHITMQ9H3K2 345 aa16.72■□□□□ 0.27
OTUB1-211ENST00000543004 GAB2Q9UQC2 676 aa16.72■□□□□ 0.27
OTUB1-211ENST00000543004 JMJD1CQ15652 2540 aa16.72■□□□□ 0.27
OTUB1-211ENST00000543004 LINC00473A8K010 186 aa16.71■□□□□ 0.27
OTUB1-211ENST00000543004 OOSP1A8MZH6 123 aa16.71■□□□□ 0.27
OTUB1-211ENST00000543004 SRSF2Q01130 221 aaKnown RBP16.71■□□□□ 0.27
OTUB1-211ENST00000543004 SCGB2A2Q13296 93 aa16.71■□□□□ 0.27
OTUB1-211ENST00000543004 LRRC75BQ2VPJ9 315 aa16.71■□□□□ 0.27
OTUB1-211ENST00000543004 CCDC144NLQ6NUI1 221 aa16.71■□□□□ 0.27
OTUB1-211ENST00000543004 OR8H3Q8N146 312 aa16.71■□□□□ 0.27
OTUB1-211ENST00000543004 ZNF383Q8NA42 475 aa16.71■□□□□ 0.27
OTUB1-211ENST00000543004 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.71■□□□□ 0.27
OTUB1-211ENST00000543004 VGLL3A8MV65 326 aa16.7■□□□□ 0.26
OTUB1-211ENST00000543004 FAUP35544 74 aaKnown RBP16.7■□□□□ 0.26
OTUB1-211ENST00000543004 CCR6P51684 374 aa16.7■□□□□ 0.26
OTUB1-211ENST00000543004 RPL30P62888 115 aaKnown RBP16.7■□□□□ 0.26
OTUB1-211ENST00000543004 EIF4EBP1Q13541 118 aaPredicted RBP16.7■□□□□ 0.26
OTUB1-211ENST00000543004 LY6EQ16553 131 aa16.7■□□□□ 0.26
OTUB1-211ENST00000543004 FAM71F2Q6NXP2 309 aa16.7■□□□□ 0.26
OTUB1-211ENST00000543004 FAM216AQ8WUB2 273 aa16.7■□□□□ 0.26
OTUB1-211ENST00000543004 PRRT1Q99946 306 aa16.7■□□□□ 0.26
OTUB1-211ENST00000543004 SLC2A8Q9NY64 477 aa16.7■□□□□ 0.26
OTUB1-211ENST00000543004 TBC1D24Q9ULP9 559 aa16.7■□□□□ 0.26
OTUB1-211ENST00000543004 SNRNP70P08621 437 aaKnown RBP16.7■□□□□ 0.26
OTUB1-211ENST00000543004 DUTP33316 252 aaKnown RBP16.7■□□□□ 0.26
OTUB1-211ENST00000543004 BTCP35070 178 aa16.7■□□□□ 0.26
OTUB1-211ENST00000543004 PHLDA2Q53GA4 152 aa16.7■□□□□ 0.26
OTUB1-211ENST00000543004 RBMS3Q6XE24 437 aaKnown RBP16.7■□□□□ 0.26
OTUB1-211ENST00000543004 CAPSLQ8WWF8 208 aa16.7■□□□□ 0.26
OTUB1-211ENST00000543004 RSRP1Q9BUV0 290 aa16.7■□□□□ 0.26
OTUB1-211ENST00000543004 DNAJC9-AS1A6NH13 148 aa16.69■□□□□ 0.26
OTUB1-211ENST00000543004 TXNL1O43396 289 aa16.69■□□□□ 0.26
OTUB1-211ENST00000543004 PGAM2P15259 253 aa16.69■□□□□ 0.26
OTUB1-211ENST00000543004 HABP2Q14520 560 aaPredicted RBP16.69■□□□□ 0.26
OTUB1-211ENST00000543004 SLC9A3R2Q15599 337 aa16.69■□□□□ 0.26
OTUB1-211ENST00000543004 CCBE1Q6UXH8 406 aaPredicted RBP16.69■□□□□ 0.26
OTUB1-211ENST00000543004 ZDHHC22Q8N966 263 aa16.69■□□□□ 0.26
OTUB1-211ENST00000543004 SCP2D1Q9UJQ7 156 aa16.69■□□□□ 0.26
OTUB1-211ENST00000543004 VENTXO95231 258 aa16.68■□□□□ 0.26
OTUB1-211ENST00000543004 IGKV1D-33P01593 117 aa16.68■□□□□ 0.26
OTUB1-211ENST00000543004 IGKV1-33P01594 117 aa16.68■□□□□ 0.26
OTUB1-211ENST00000543004 UCP3P55916 312 aa16.68■□□□□ 0.26
OTUB1-211ENST00000543004 HNF4GQ14541 408 aa16.68■□□□□ 0.26
OTUB1-211ENST00000543004 OR2B11Q5JQS5 317 aa16.68■□□□□ 0.26
OTUB1-211ENST00000543004 TMEM219Q86XT9 240 aa16.68■□□□□ 0.26
OTUB1-211ENST00000543004 BVESQ8NE79 360 aa16.68■□□□□ 0.26
OTUB1-211ENST00000543004 ZNF418Q8TF45 676 aaPredicted RBP16.68■□□□□ 0.26
OTUB1-211ENST00000543004 DEDD2Q8WXF8 326 aa16.68■□□□□ 0.26
OTUB1-211ENST00000543004 RITA1Q96K30 269 aa16.68■□□□□ 0.26
OTUB1-211ENST00000543004 FAM90A9PA6NNJ1 464 aa16.67■□□□□ 0.26
OTUB1-211ENST00000543004 H0YJW9 148 aa16.67■□□□□ 0.26
OTUB1-211ENST00000543004 LYRM1O43325 122 aa16.67■□□□□ 0.26
OTUB1-211ENST00000543004 SLC22A5O76082 557 aa16.67■□□□□ 0.26
OTUB1-211ENST00000543004 BRS3P32247 399 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms