RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 HIST1H1AQ02539 215 aaPredicted RBP9.48□□□□□ -0.89
CDH3-203ENST00000542274 FAM78BQ5VT40 261 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 NFAM1Q8NET5 270 aaPredicted RBP9.48□□□□□ -0.89
CDH3-203ENST00000542274 OR8G5Q8NG78 346 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 OR51A4Q8NGJ6 313 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 GFI1Q99684 422 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 ABHD6Q9BV23 337 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 MAP1LC3BQ9GZQ8 125 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 OR5V1Q9UGF6 321 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 TMED7Q9Y3B3 224 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 DMXL1Q9Y485 3027 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 RIF1Q5UIP0 2472 aaKnown RBP9.48□□□□□ -0.89
CDH3-203ENST00000542274 MPPED1O15442 326 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 AGFG2O95081 481 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 SRP19P09132 144 aaKnown RBP9.48□□□□□ -0.89
CDH3-203ENST00000542274 FTH1P19P0C7X4 201 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 GP1BBP13224 206 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 FAM3BP58499 235 aaPredicted RBP9.48□□□□□ -0.89
CDH3-203ENST00000542274 ACKR1Q16570 336 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 MDGA2Q7Z553 956 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 CYB561D1Q8N8Q1 229 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 OR13G1Q8NGZ3 307 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 FGGYQ96C11 551 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 AQP10Q96PS8 301 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 NPFFR1Q9GZQ6 430 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 ANKRD10Q9NXR5 420 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 PLA2G3Q9NZ20 509 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 FREM3P0C091 2139 aa9.48□□□□□ -0.89
CDH3-203ENST00000542274 H3BML4 177 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 CD55P08174 381 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 CD59P13987 128 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 MRPL23Q16540 153 aaKnown RBP9.47□□□□□ -0.89
CDH3-203ENST00000542274 MPV17L2Q567V2 206 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 SPSB3Q6PJ21 355 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 C19orf35Q6ZS72 473 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 TGIF2LYQ8IUE0 185 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.47□□□□□ -0.89
CDH3-203ENST00000542274 ZNF433Q8N7K0 673 aaPredicted RBP9.47□□□□□ -0.89
CDH3-203ENST00000542274 NECAP1Q8NC96 275 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 CFHR4Q92496 578 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 NRGNQ92686 78 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 TRIB1Q96RU8 372 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 KCNK17Q96T54 332 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 ANAPC13Q9BS18 74 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 A0A087WX48 190 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 MED19A0JLT2 244 aaPredicted RBP9.47□□□□□ -0.89
CDH3-203ENST00000542274 DIRC3C9JPN6 131 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 DANCRP0C864 163 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 PGCP20142 388 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 SGCBQ16585 318 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 LFNGQ8NES3 379 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 APOBEC3DQ96AK3 386 aaPredicted RBP9.47□□□□□ -0.89
CDH3-203ENST00000542274 NECAP2Q9NVZ3 263 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 CPAMD8Q8IZJ3 1885 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 MUC6Q6W4X9 2439 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 RBFOX3A6NFN3 312 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 SMIM9A6NGZ8 99 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 UPK3AO75631 287 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 C1QL1O75973 258 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 HLA-DQA2P01906 255 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 ACP1P24666 158 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 C1orf140Q5VVS0 124 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 SYS1Q8N2H4 156 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 PYGO2Q9BRQ0 406 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 ULBP2Q9BZM5 246 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 CRIM1Q9NZV1 1036 aa9.47□□□□□ -0.89
CDH3-203ENST00000542274 RALYQ9UKM9 306 aaKnown RBP9.47□□□□□ -0.89
CDH3-203ENST00000542274 CFAP47Q6ZTR5 3102 aa9.46□□□□□ -0.89
CDH3-203ENST00000542274 TRAV36DV7A0A075B6V5 113 aa9.46□□□□□ -0.89
CDH3-203ENST00000542274 LILRA1O75019 489 aa9.46□□□□□ -0.89
CDH3-203ENST00000542274 PRH1P02810 166 aa9.46□□□□□ -0.89
CDH3-203ENST00000542274 SERPINE2P07093 398 aa9.46□□□□□ -0.89
CDH3-203ENST00000542274 AKAIN1P0CW23 69 aa9.46□□□□□ -0.89
CDH3-203ENST00000542274 CTLA4P16410 223 aa9.46□□□□□ -0.89
CDH3-203ENST00000542274 PRTN3P24158 256 aa9.46□□□□□ -0.89
CDH3-203ENST00000542274 CX3CR1P49238 355 aa9.46□□□□□ -0.89
CDH3-203ENST00000542274 FMODQ06828 376 aa9.46□□□□□ -0.89
CDH3-203ENST00000542274 WASHC3Q9Y3C0 194 aa9.46□□□□□ -0.89
CDH3-203ENST00000542274 ZFHX2Q9C0A1 2572 aaPredicted RBP9.46□□□□□ -0.9
CDH3-203ENST00000542274 EML6Q6ZMW3 1958 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 IGLV3-12A0A075B6K2 115 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 IGKV1D-43A0A0B4J1Z2 117 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 A0A1W2PQD3 144 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 SLC16A7O60669 478 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 NPIPB7O75200 414 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 ADH4P08319 380 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 CDK2P24941 298 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 EIF2B1Q14232 305 aaKnown RBP9.46□□□□□ -0.9
CDH3-203ENST00000542274 Q8N976 141 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 OR8S1Q8NH09 359 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 S100A16Q96FQ6 103 aaKnown RBP9.46□□□□□ -0.9
CDH3-203ENST00000542274 C1QTNF4Q9BXJ3 329 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 FNDC4Q9H6D8 234 aaPredicted RBP9.46□□□□□ -0.9
CDH3-203ENST00000542274 UBTD1Q9HAC8 227 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 MED29Q9NX70 200 aa9.46□□□□□ -0.9
CDH3-203ENST00000542274 EXPH5Q8NEV8 1989 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 MUC21A0A0G2JKD1 596 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 MUC21A0A140T8X8 626 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 F5H5K5 113 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms