RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ELP2Q6IA86 826 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 DUX4L9Q6RFH8 374 aaPredicted RBP4.35□□□□□ -1.71
CPSF7-220ENST00000541963 BRD3OSQ6XYD6 125 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 SAXO1Q8IYX7 474 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 SLC38A6Q8IZM9 456 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 FAM58AQ8N1B3 248 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 CD177Q8N6Q3 437 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 LINC00469Q8N7U9 141 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.35□□□□□ -1.71
CPSF7-220ENST00000541963 C3orf56Q8N813 242 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 ZDHHC22Q8N966 263 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 DUSP18Q8NEJ0 188 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 OR13C9Q8NGT0 318 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 OR52N1Q8NH53 320 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 NDNFQ8TB73 568 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 CNIH3Q8TBE1 160 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 DEDD2Q8WXF8 326 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 ASB13Q8WXK3 278 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 THRSPQ92748 146 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 GGHQ92820 318 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 UFD1Q92890 307 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 ZNF488Q96MN9 340 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 TBX15Q96SF7 602 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 GPER1Q99527 375 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 S100A13Q99584 98 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 MTCH1Q9NZJ7 389 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 CKLFQ9UBR5 152 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 UBQLN2Q9UHD9 624 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 ZNF222Q9UK12 451 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 PRELID3BQ9Y3B1 194 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 WNK2Q9Y3S1 2297 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 TLN2Q9Y4G6 2542 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 NSD1Q96L73 2696 aaPredicted RBP4.35□□□□□ -1.71
CPSF7-220ENST00000541963 SONP18583 2426 aaKnown RBP4.34□□□□□ -1.71
CPSF7-220ENST00000541963 ABCA2Q9BZC7 2435 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 CUBNO60494 3623 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 IGKV1-27A0A075B6S5 117 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 IGKV1-9A0A0C4DH69 117 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 A0A1B0GUS0 222 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 hADV38S2A0JD32 116 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 LEUTXA8MZ59 168 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 MYL12BO14950 172 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 DEGS1O15121 323 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 NPFFO15130 113 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 SLC22A5O76082 557 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 SNAPINO95295 136 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 HAND1O96004 215 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 ALDOBP05062 364 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 RRASP10301 218 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 BCL3P20749 454 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 GABRR1P24046 479 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 SDC2P34741 201 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 TGFBR2P37173 567 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 EDDM3BP56851 147 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 ERVFC1-1P60608 527 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 SSTP61278 116 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 VBP1P61758 197 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 RRAS2P62070 204 aaPredicted RBP4.34□□□□□ -1.71
CPSF7-220ENST00000541963 DLK1P80370 383 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 MEF2CQ06413 473 aaPredicted RBP4.34□□□□□ -1.71
CPSF7-220ENST00000541963 ZNF146Q15072 292 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 CDK5R1Q15078 307 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 SLC9A3R2Q15599 337 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 KISS1Q15726 138 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 DDI2Q5TDH0 399 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 OR2G6Q5TZ20 316 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 RUSC1-AS1Q66K80 236 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 PDZD9Q8IXQ8 264 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 BATF2Q8N1L9 274 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 CHST4Q8NCG5 386 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 PXT1Q8NFP0 134 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 OR4M1Q8NGD0 313 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 OR51A4Q8NGJ6 313 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 OR13D1Q8NGV5 346 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 SMIM19Q96E16 107 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 PDCD1LG2Q9BQ51 273 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 C7orf50Q9BRJ6 194 aaKnown RBP4.34□□□□□ -1.71
CPSF7-220ENST00000541963 TCEAL7Q9BRU2 100 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 ZNF649Q9BS31 505 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 CDCA4Q9BXL8 241 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 ELL3Q9HB65 397 aaPredicted RBP4.34□□□□□ -1.71
CPSF7-220ENST00000541963 Q9N2K0 584 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 EXOSC4Q9NPD3 245 aaKnown RBP4.34□□□□□ -1.71
CPSF7-220ENST00000541963 TMEM138Q9NPI0 162 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 ESM1Q9NQ30 184 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 SIRT7Q9NRC8 400 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 RBFOX1Q9NWB1 397 aaKnown RBP4.34□□□□□ -1.71
CPSF7-220ENST00000541963 PSORS1C1Q9UIG5 152 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 ELF5Q9UKW6 265 aaPredicted RBP4.34□□□□□ -1.71
CPSF7-220ENST00000541963 GSTK1Q9Y2Q3 226 aa4.34□□□□□ -1.71
CPSF7-220ENST00000541963 SVEP1Q4LDE5 3571 aa4.33□□□□□ -1.72
CPSF7-220ENST00000541963 TRGV10A0A0A0MS01 117 aa4.33□□□□□ -1.72
CPSF7-220ENST00000541963 A0A1W2PN81 502 aa4.33□□□□□ -1.72
CPSF7-220ENST00000541963 RNASEK-C17orf49H0YIS7 233 aa4.33□□□□□ -1.72
CPSF7-220ENST00000541963 I3L521 148 aa4.33□□□□□ -1.72
CPSF7-220ENST00000541963 GATCO43716 136 aaKnown RBP4.33□□□□□ -1.72
CPSF7-220ENST00000541963 ANGPTL7O43827 346 aa4.33□□□□□ -1.72
CPSF7-220ENST00000541963 FCN3O75636 299 aa4.33□□□□□ -1.72
CPSF7-220ENST00000541963 DHFRP00374 187 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms