RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 DTD1Q8TEA8 209 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 TMEM239Q8WW34 195 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 OR5P3Q8WZ94 311 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 UBE2WQ96B02 151 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 CMBLQ96DG6 245 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 ZMYND19Q96E35 227 aaPredicted RBP1.08□□□□□ -2.24
PRKDC-210ENST00000541488 C19orf60Q96EN9 201 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 ULBP1Q9BZM6 244 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 POMKQ9H5K3 350 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 TMBIM4Q9HC24 238 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 CLEC2DQ9UHP7 191 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 RBMX2Q9Y388 322 aaKnown RBP1.08□□□□□ -2.24
PRKDC-210ENST00000541488 ZNF337Q9Y3M9 751 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 HYDINQ4G0P3 5121 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 LCTP09848 1927 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 COL6A5A8TX70 2615 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 LAMA1P25391 3075 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 BRWD1Q9NSI6 2320 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 CACNA1HO95180 2353 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 MED13LQ71F56 2210 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 TRBV24-1A0A075B6N3 115 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 A0A1W2PRG6 482 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 OR5H14A6NHG9 310 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 FAM183AA6NL82 134 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 RNASEK-C17orf49H0YIS7 233 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 TMEM250H0YL14 139 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 CDIPTO14735 213 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 ZNF73O43830 326 aaPredicted RBP1.07□□□□□ -2.24
PRKDC-210ENST00000541488 PDCD6O75340 191 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 SOX14O95416 240 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 CST4P01036 141 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 GUSBP08236 651 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 CTSGP08311 255 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 PSKH1P11801 424 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 CCL2P13500 99 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 M6PRP20645 277 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 CSRP1P21291 193 aaKnown RBP1.07□□□□□ -2.24
PRKDC-210ENST00000541488 TSPOP30536 169 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 UGT2B10P36537 528 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 RAB25P57735 213 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 CD164Q04900 197 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 TRAM1Q15629 374 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 TRIP13Q15645 432 aaPredicted RBP1.07□□□□□ -2.24
PRKDC-210ENST00000541488 BSXQ3C1V8 233 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 FBXO48Q5FWF7 155 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 FAM162BQ5T6X4 162 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 Q6ZT83 130 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 FAM183BPQ6ZVS7 135 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 NIT1Q86X76 327 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 C10orf107Q8IVU9 208 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 FER1L6-AS1Q8NA97 138 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 OR8K1Q8NGG5 319 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 OR2Y1Q8NGV0 311 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 IFT81Q8WYA0 676 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 RAD51AP1Q96B01 352 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 CLDN23Q96B33 292 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 CCDC124Q96CT7 223 aaKnown RBP1.07□□□□□ -2.24
PRKDC-210ENST00000541488 SIKE1Q9BRV8 207 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 TRIM4Q9C037 500 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 ZNF436Q9C0F3 470 aaPredicted RBP1.07□□□□□ -2.24
PRKDC-210ENST00000541488 OR2D2Q9H210 308 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 HAUS4Q9H6D7 363 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 CYB5R1Q9UHQ9 305 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 STK38LQ9Y2H1 464 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 PLXNB2O15031 1838 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 PSME4Q14997 1843 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 ZNF236Q9UL36 1845 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 ATRQ13535 2644 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 USP42Q9H9J4 1324 aaKnown RBP1.07□□□□□ -2.24
PRKDC-210ENST00000541488 CREBBPQ92793 2442 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 KMT2CQ8NEZ4 4911 aaKnown RBP1.07□□□□□ -2.24
PRKDC-210ENST00000541488 CPDO75976 1380 aa1.07□□□□□ -2.24
PRKDC-210ENST00000541488 ZNF638Q14966 1978 aaKnown RBP1.07□□□□□ -2.24
PRKDC-210ENST00000541488 PIK3C2GO75747 1445 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 CPSF1Q10570 1443 aaKnown RBP1.06□□□□□ -2.24
PRKDC-210ENST00000541488 STAB1Q9NY15 2570 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 DOCK6Q96HP0 2047 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 F8P00451 2351 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 PKD1L1Q8TDX9 2849 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 LRRK2Q5S007 2527 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 IGKV1D-37A0A075B6S9 117 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 IGHV3OR15-7A0A075B7D8 119 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 TRAV8-2A0A0B4J237 113 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 LOC100506127A0A0U1RQW1 187 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 A0A1B0GW15 77 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 A0A1W2PNM2 257 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 ZNF879B4DU55 563 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 F8VP50 259 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 H3BP45 60 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 FABP7O15540 132 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 GYPCP04921 128 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 TPM1P09493 284 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 CGB3P0DN86 165 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 CGB7P0DN87 165 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 GABRA1P14867 456 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 AKR1C4P17516 323 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 PYCR1P32322 319 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 INPP1P49441 399 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 ETV1P50549 477 aa1.06□□□□□ -2.24
PRKDC-210ENST00000541488 PLTPP55058 493 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms