RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 ABRACLQ9P1F3 81 aa20.47■□□□□ 0.87
CHFR-218ENST00000540963 WASHC3Q9Y3C0 194 aa20.47■□□□□ 0.87
CHFR-218ENST00000540963 A0A0G2JLM5 398 aa20.46■□□□□ 0.87
CHFR-218ENST00000540963 EFCAB10A6NFE3 127 aa20.46■□□□□ 0.87
CHFR-218ENST00000540963 H0YJW9 148 aa20.46■□□□□ 0.87
CHFR-218ENST00000540963 CRTAPO75718 401 aaPredicted RBP20.46■□□□□ 0.87
CHFR-218ENST00000540963 INSL4Q14641 139 aa20.46■□□□□ 0.87
CHFR-218ENST00000540963 NANOGP1Q8N7R0 232 aa20.46■□□□□ 0.87
CHFR-218ENST00000540963 OR9G4Q8NGQ1 327 aa20.46■□□□□ 0.87
CHFR-218ENST00000540963 THAP7Q9BT49 309 aaPredicted RBP20.46■□□□□ 0.87
CHFR-218ENST00000540963 FAM103A1Q9BTL3 118 aaKnown RBP20.46■□□□□ 0.87
CHFR-218ENST00000540963 TUBA4BQ9H853 241 aa20.46■□□□□ 0.87
CHFR-218ENST00000540963 SIGLEC8Q9NYZ4 499 aa20.46■□□□□ 0.87
CHFR-218ENST00000540963 GHRLQ9UBU3 117 aa20.46■□□□□ 0.87
CHFR-218ENST00000540963 SLC23A1Q9UHI7 598 aa20.46■□□□□ 0.87
CHFR-218ENST00000540963 GAB2Q9UQC2 676 aa20.46■□□□□ 0.87
CHFR-218ENST00000540963 ITGB1BP1O14713 200 aa20.45■□□□□ 0.86
CHFR-218ENST00000540963 SLC22A1O15245 554 aa20.45■□□□□ 0.86
CHFR-218ENST00000540963 CD1AP06126 327 aa20.45■□□□□ 0.86
CHFR-218ENST00000540963 AHSA2Q719I0 299 aa20.45■□□□□ 0.86
CHFR-218ENST00000540963 C8orf59Q8N0T1 100 aaPredicted RBP20.45■□□□□ 0.86
CHFR-218ENST00000540963 BPIFB6Q8NFQ5 453 aa20.45■□□□□ 0.86
CHFR-218ENST00000540963 C13orf42A0A1B0GVH6 325 aa20.44■□□□□ 0.86
CHFR-218ENST00000540963 SPDEFO95238 335 aa20.44■□□□□ 0.86
CHFR-218ENST00000540963 CELP19835 753 aa20.44■□□□□ 0.86
CHFR-218ENST00000540963 LCN12Q6JVE5 192 aa20.44■□□□□ 0.86
CHFR-218ENST00000540963 IL34Q6ZMJ4 242 aa20.44■□□□□ 0.86
CHFR-218ENST00000540963 C5orf24Q7Z6I8 188 aa20.44■□□□□ 0.86
CHFR-218ENST00000540963 UQCC2Q9BRT2 126 aa20.44■□□□□ 0.86
CHFR-218ENST00000540963 METTL1Q9UBP6 276 aaKnown RBP20.44■□□□□ 0.86
CHFR-218ENST00000540963 H7C2Y5 167 aa20.43■□□□□ 0.86
CHFR-218ENST00000540963 ST8SIA5O15466 376 aa20.43■□□□□ 0.86
CHFR-218ENST00000540963 RPL39P5Q59GN2 51 aa20.43■□□□□ 0.86
CHFR-218ENST00000540963 NKAIN3Q8N8D7 197 aa20.43■□□□□ 0.86
CHFR-218ENST00000540963 POC5Q8NA72 575 aa20.43■□□□□ 0.86
CHFR-218ENST00000540963 BRI3O95415 125 aa20.42■□□□□ 0.86
CHFR-218ENST00000540963 CA2P00918 260 aa20.42■□□□□ 0.86
CHFR-218ENST00000540963 WNT4P56705 351 aa20.42■□□□□ 0.86
CHFR-218ENST00000540963 PSG5Q15238 335 aa20.42■□□□□ 0.86
CHFR-218ENST00000540963 Q8N402 240 aa20.42■□□□□ 0.86
CHFR-218ENST00000540963 TSNAXQ99598 290 aaKnown RBP20.42■□□□□ 0.86
CHFR-218ENST00000540963 TAS2R43P59537 309 aa20.41■□□□□ 0.86
CHFR-218ENST00000540963 MED21Q13503 144 aa20.41■□□□□ 0.86
CHFR-218ENST00000540963 GLDNQ6ZMI3 551 aaPredicted RBP20.41■□□□□ 0.86
CHFR-218ENST00000540963 IL1F10Q8WWZ1 152 aa20.41■□□□□ 0.86
CHFR-218ENST00000540963 NEDD4LQ96PU5 975 aa20.41■□□□□ 0.86
CHFR-218ENST00000540963 CLCC1Q96S66 551 aa20.41■□□□□ 0.86
CHFR-218ENST00000540963 AGMATQ9BSE5 352 aa20.41■□□□□ 0.86
CHFR-218ENST00000540963 TMED9Q9BVK6 235 aa20.41■□□□□ 0.86
CHFR-218ENST00000540963 PLECQ15149 4684 aaKnown RBP20.41■□□□□ 0.86
CHFR-218ENST00000540963 TATDN3Q17R31 274 aa20.4■□□□□ 0.86
CHFR-218ENST00000540963 LINC00322Q6ZN03 302 aaPredicted RBP20.4■□□□□ 0.86
CHFR-218ENST00000540963 TMEM68Q96MH6 324 aa20.4■□□□□ 0.86
CHFR-218ENST00000540963 SULT4A1Q9BR01 284 aa20.4■□□□□ 0.86
CHFR-218ENST00000540963 HIPK2Q9H2X6 1198 aa20.4■□□□□ 0.86
CHFR-218ENST00000540963 ZNF355PQ9NSJ1 428 aa20.4■□□□□ 0.86
CHFR-218ENST00000540963 LSM2Q9Y333 95 aaKnown RBP20.4■□□□□ 0.86
CHFR-218ENST00000540963 SHISA3A0PJX4 238 aa20.39■□□□□ 0.85
CHFR-218ENST00000540963 AADACP22760 399 aa20.39■□□□□ 0.85
CHFR-218ENST00000540963 FXYD3Q14802 87 aa20.39■□□□□ 0.85
CHFR-218ENST00000540963 ZNF880Q6PDB4 577 aa20.39■□□□□ 0.85
CHFR-218ENST00000540963 SVOPQ8N4V2 548 aa20.39■□□□□ 0.85
CHFR-218ENST00000540963 OR2K2Q8NGT1 345 aa20.39■□□□□ 0.85
CHFR-218ENST00000540963 NRG4Q8WWG1 115 aa20.39■□□□□ 0.85
CHFR-218ENST00000540963 EDARADDQ8WWZ3 215 aa20.39■□□□□ 0.85
CHFR-218ENST00000540963 THRSPQ92748 146 aa20.39■□□□□ 0.85
CHFR-218ENST00000540963 NAPSAO96009 420 aa20.38■□□□□ 0.85
CHFR-218ENST00000540963 CDK1P06493 297 aa20.38■□□□□ 0.85
CHFR-218ENST00000540963 UBBP0CG47 229 aa20.38■□□□□ 0.85
CHFR-218ENST00000540963 SYNJ2BPP57105 145 aa20.38■□□□□ 0.85
CHFR-218ENST00000540963 RNLSQ5VYX0 342 aa20.38■□□□□ 0.85
CHFR-218ENST00000540963 MOB1BQ7L9L4 216 aa20.38■□□□□ 0.85
CHFR-218ENST00000540963 LRRTM1Q86UE6 522 aa20.38■□□□□ 0.85
CHFR-218ENST00000540963 FAM46BQ96A09 425 aa20.38■□□□□ 0.85
CHFR-218ENST00000540963 CEPT1Q9Y6K0 416 aa20.38■□□□□ 0.85
CHFR-218ENST00000540963 MYL12BO14950 172 aa20.37■□□□□ 0.85
CHFR-218ENST00000540963 CPEP16870 476 aa20.37■□□□□ 0.85
CHFR-218ENST00000540963 GRPEL2Q8TAA5 225 aa20.37■□□□□ 0.85
CHFR-218ENST00000540963 ABHD14BQ96IU4 210 aa20.37■□□□□ 0.85
CHFR-218ENST00000540963 PEF1Q9UBV8 284 aaKnown RBP20.37■□□□□ 0.85
CHFR-218ENST00000540963 ANKRD34BA5PLL1 514 aa20.36■□□□□ 0.85
CHFR-218ENST00000540963 CSN3P07498 182 aa20.36■□□□□ 0.85
CHFR-218ENST00000540963 CD37P11049 281 aa20.36■□□□□ 0.85
CHFR-218ENST00000540963 IRF3Q14653 427 aa20.36■□□□□ 0.85
CHFR-218ENST00000540963 ACSM3Q53FZ2 586 aa20.36■□□□□ 0.85
CHFR-218ENST00000540963 ZNF343Q6P1L6 599 aa20.36■□□□□ 0.85
CHFR-218ENST00000540963 PDPNQ86YL7 162 aa20.36■□□□□ 0.85
CHFR-218ENST00000540963 LAX1Q8IWV1 398 aa20.36■□□□□ 0.85
CHFR-218ENST00000540963 FAAP24Q9BTP7 215 aa20.36■□□□□ 0.85
CHFR-218ENST00000540963 ALMS1Q8TCU4 4167 aa20.36■□□□□ 0.85
CHFR-218ENST00000540963 OR2A4O95047 310 aa20.35■□□□□ 0.85
CHFR-218ENST00000540963 IGKV1-16P04430 117 aa20.35■□□□□ 0.85
CHFR-218ENST00000540963 MECP2P51608 486 aaKnown RBP20.35■□□□□ 0.85
CHFR-218ENST00000540963 RPS16P62249 146 aaKnown RBP20.35■□□□□ 0.85
CHFR-218ENST00000540963 OR10K2Q6IF99 312 aa20.35■□□□□ 0.85
CHFR-218ENST00000540963 OR5T1Q8NG75 326 aa20.35■□□□□ 0.85
CHFR-218ENST00000540963 USMG5Q96IX5 58 aa20.35■□□□□ 0.85
CHFR-218ENST00000540963 RIMS4Q9H426 269 aaPredicted RBP20.35■□□□□ 0.85
CHFR-218ENST00000540963 PTGES3LE9PB15 166 aa20.34■□□□□ 0.85
CHFR-218ENST00000540963 ZBTB25P24278 435 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms