RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 AKAIN1P0CW23 69 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 RRASP10301 218 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 RAB13P51153 203 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 DGCR2P98153 550 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 STEAP1BQ6NZ63 245 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 C16orf87Q6PH81 154 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 OR8H1Q8NGG4 311 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 CYYR1Q96J86 154 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 RNF5Q99942 180 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 WDR12Q9GZL7 423 aaKnown RBP14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 OR2D2Q9H210 308 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 SAA2-SAA4A0A096LPE2 208 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 H3BUX3 64 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 SLC31A2O15432 143 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 RAB3DO95716 219 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 PMP2P02689 132 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 SAA2P0DJI9 122 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 NFYAP23511 347 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 SLC9A3R2Q15599 337 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 MOB3BQ86TA1 216 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 ODF3L1Q8IXM7 274 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 CMTM1Q8IZ96 169 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 TOMM5Q8N4H5 51 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 SCGB3A2Q96PL1 93 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 HSD17B10Q99714 261 aaKnown RBP14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 PRRT1Q99946 306 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 C1RLQ9NZP8 487 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 SCP2D1Q9UJQ7 156 aa14.12□□□□□ -0.15
CLSTN3-210ENST00000540931 A0A1W2PPI3 338 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 ANKRD20A5PA0PJZ0 165 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 DNAJC9-AS1A6NH13 148 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 FAM90A9PA6NNJ1 464 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 APOA2P02652 100 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 FCER2P06734 321 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 RFX2P48378 723 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 THBS3P49746 956 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 UCP3P55916 312 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 TRIQKQ629K1 86 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 OR2T10Q8NGZ9 312 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 TMEM158Q8WZ71 300 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 MOB3AQ96BX8 217 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 ZNF2Q9BSG1 426 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 CCDC32Q9BV29 185 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 TCF19Q9Y242 345 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 PRELID3BQ9Y3B1 194 aa14.11□□□□□ -0.15
CLSTN3-210ENST00000540931 CENPXA8MT69 81 aa14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 TIMM23O14925 209 aa14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 IGHV4-59P01825 116 aa14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 CD3DP04234 171 aa14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 CD40LGP29965 261 aa14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 UBA52P62987 128 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 EBI3Q14213 229 aa14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 LDLRAD2Q5SZI1 272 aa14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 ZNF66Q6ZN08 573 aa14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 ZDHHC22Q8N966 263 aa14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 C17orf50Q8WW18 174 aa14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 ZNF486Q96H40 463 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 ABHD14BQ96IU4 210 aa14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 SRRQ9GZT4 340 aa14.1□□□□□ -0.15
CLSTN3-210ENST00000540931 MDFIC2A0A1B0GVS7 189 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 NAP1L6A6NFF2 107 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 MOSP00540 346 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 AADACP22760 399 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 KIR2DS2P43631 304 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 CATR1Q13166 79 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 LSAMPQ13449 338 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 SURF2Q15527 256 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 ZNF79Q15937 498 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 RNASE12Q5GAN4 147 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 UTF1Q5T230 341 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 ZNF660Q6AZW8 331 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 C5orf24Q7Z6I8 188 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 PDPNQ86YL7 162 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 DYNAPQ8N1N2 210 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 DRAM1Q8N682 238 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 TCTEX1D1Q8N7M0 179 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 TERB2Q8NHR7 220 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 ZFAND1Q8TCF1 268 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 ZNF251Q9BRH9 671 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 C7orf50Q9BRJ6 194 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 AIFM2Q9BRQ8 373 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 SLC5A7Q9GZV3 580 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 SDHAF2Q9NX18 166 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 RNF150Q9ULK6 438 aa14.09□□□□□ -0.15
CLSTN3-210ENST00000540931 OR2F2O95006 317 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 PPP5CP53041 499 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 HES1Q14469 280 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 ZNF846Q147U1 533 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 RTL8BQ17RB0 113 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 DHRS7BQ6IAN0 325 aaPredicted RBP14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 SLC38A6Q8IZM9 456 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 POC5Q8NA72 575 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 OR5AN1Q8NGI8 311 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 OR56B4Q8NH76 319 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 CD300LFQ8TDQ1 290 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 SECTM1Q8WVN6 248 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 CFHR4Q92496 578 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 NABP2Q9BQ15 211 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 NPFFR1Q9GZQ6 430 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 RANBP3Q9H6Z4 567 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms