RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 COMMD1Q8N668 190 aa11.15□□□□□ -0.62
USP28-209ENST00000540925 OR5H6Q8NGV6 325 aa11.15□□□□□ -0.62
USP28-209ENST00000540925 MAFIPQ8WZ33 124 aa11.15□□□□□ -0.62
USP28-209ENST00000540925 PHF21AQ96BD5 680 aa11.15□□□□□ -0.62
USP28-209ENST00000540925 C5orf30Q96GV9 206 aa11.15□□□□□ -0.62
USP28-209ENST00000540925 RASL11BQ9BPW5 248 aa11.15□□□□□ -0.62
USP28-209ENST00000540925 RHBDL2Q9NX52 303 aa11.15□□□□□ -0.62
USP28-209ENST00000540925 GAB2Q9UQC2 676 aa11.15□□□□□ -0.62
USP28-209ENST00000540925 ETV7Q9Y603 341 aa11.15□□□□□ -0.62
USP28-209ENST00000540925 NBR2O15453 112 aa11.14□□□□□ -0.63
USP28-209ENST00000540925 SSX5O60225 188 aa11.14□□□□□ -0.63
USP28-209ENST00000540925 TMEM127O75204 238 aa11.14□□□□□ -0.63
USP28-209ENST00000540925 SCGNO76038 276 aa11.14□□□□□ -0.63
USP28-209ENST00000540925 GSTP1P09211 210 aaKnown RBP11.14□□□□□ -0.63
USP28-209ENST00000540925 TGFBR1P36897 503 aa11.14□□□□□ -0.63
USP28-209ENST00000540925 MRPS15P82914 257 aaKnown RBP11.14□□□□□ -0.63
USP28-209ENST00000540925 C5orf64Q2M2E5 130 aa11.14□□□□□ -0.63
USP28-209ENST00000540925 GLDNQ6ZMI3 551 aaPredicted RBP11.14□□□□□ -0.63
USP28-209ENST00000540925 ZNF383Q8NA42 475 aa11.14□□□□□ -0.63
USP28-209ENST00000540925 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.14□□□□□ -0.63
USP28-209ENST00000540925 ZFP57Q9NU63 452 aa11.14□□□□□ -0.63
USP28-209ENST00000540925 RNF150Q9ULK6 438 aa11.14□□□□□ -0.63
USP28-209ENST00000540925 IGHV7-81A0A0B4J1V7 117 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 TMEM235A6NFC5 223 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 BET1O15155 118 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 RBBP9O75884 186 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 IGHG4P01861 327 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 MC5RP33032 325 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 CRIP2P52943 208 aaPredicted RBP11.13□□□□□ -0.63
USP28-209ENST00000540925 LINC00205P59089 165 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 SLC35B1P78383 322 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 PNLIPRP3Q17RR3 467 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 TIMM50Q3ZCQ8 353 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 C19orf54Q5BKX5 351 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 C18orf65Q6ZTR6 163 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 C1QL4Q86Z23 238 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 H1FOOQ8IZA3 346 aaPredicted RBP11.13□□□□□ -0.63
USP28-209ENST00000540925 OR10J5Q8NHC4 309 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 MYOZ3Q8TDC0 251 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 RNF5Q99942 180 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 DCSTAMPQ9H295 470 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 WASHC3Q9Y3C0 194 aa11.13□□□□□ -0.63
USP28-209ENST00000540925 A0A0A6YYH2 397 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 A6NJ64 397 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 IGKV1-16P04430 117 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 PSMB8P28062 276 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 PPIFP30405 207 aaKnown RBP11.12□□□□□ -0.63
USP28-209ENST00000540925 SLC6A1P30531 599 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 FOXE3Q13461 319 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 ARFRP1Q13795 201 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 TEX38Q6PEX7 206 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 DRAXINQ8NBI3 349 aaPredicted RBP11.12□□□□□ -0.63
USP28-209ENST00000540925 NUDCD2Q8WVJ2 157 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 GON7Q9BXV9 100 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 OR51J1Q9H342 316 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 SDHAF2Q9NX18 166 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 ZNF221Q9UK13 617 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 SPATA2Q9UM82 520 aa11.12□□□□□ -0.63
USP28-209ENST00000540925 RRHO14718 337 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 RRP9O43818 475 aaKnown RBP11.11□□□□□ -0.63
USP28-209ENST00000540925 AIREO43918 545 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 TFAP2AP05549 437 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 ELANEP08246 267 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 OR8U9P0C7N5 309 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 TALDO1P37837 337 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 RPS19P39019 145 aaKnown RBP11.11□□□□□ -0.63
USP28-209ENST00000540925 PITPNAQ00169 270 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 NDPQ00604 133 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 OXLD1Q5BKU9 147 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 IDNKQ5T6J7 187 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 LINC00482Q8N8I6 264 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 OR8U1Q8NH10 309 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 VCX3AQ9NNX9 186 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 NBEAL2Q6ZNJ1 2754 aa11.11□□□□□ -0.63
USP28-209ENST00000540925 M0R1X1 148 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 FCN1O00602 326 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 ATP6V0E1O15342 81 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 IGLV1-40P01703 118 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 RPLP1P05386 114 aaKnown RBP11.1□□□□□ -0.63
USP28-209ENST00000540925 SMIM18P0DKX4 95 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 PF4V1P10720 104 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 EGR2P11161 476 aaPredicted RBP11.1□□□□□ -0.63
USP28-209ENST00000540925 THBS3P49746 956 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 KIAA0141Q14154 515 aaPredicted RBP11.1□□□□□ -0.63
USP28-209ENST00000540925 PSG5Q15238 335 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 KHDC1LQ5JSQ8 128 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 LIN54Q6MZP7 749 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 PDPNQ86YL7 162 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 CROCCP3Q8IVE0 287 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 MINDY2Q8NBR6 621 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 OR13F1Q8NGS4 319 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 DDB2Q92466 427 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 P2RX4Q99571 388 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 OR2D2Q9H210 308 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 FBXL15Q9H469 300 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 FBXO7Q9Y3I1 522 aa11.1□□□□□ -0.63
USP28-209ENST00000540925 DNAH9Q9NYC9 4486 aa11.09□□□□□ -0.63
USP28-209ENST00000540925 G3V318 75 aa11.09□□□□□ -0.63
USP28-209ENST00000540925 TUSC2O75896 110 aa11.09□□□□□ -0.63
USP28-209ENST00000540925 SPDEFO95238 335 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms