RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SLC2A2P11168 524 aaPredicted RBP8.16□□□□□ -1.1
CDCA3-208ENST00000540683 PSMB8P28062 276 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 LGALS7P47929 136 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 RAB25P57735 213 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 DGCR2P98153 550 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 RUNX1Q01196 453 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 FABP5Q01469 135 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 GNMTQ14749 295 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 CD200R1LQ6Q8B3 271 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 Q6ZPA2 131 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 LCNL1Q6ZST4 164 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 ODF3L1Q8IXM7 274 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 OR10R2Q8NGX6 335 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 ANAPC16Q96DE5 110 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 ARHGAP5-AS1Q96IT6 56 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 ADTRPQ96IZ2 230 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 TMEM68Q96MH6 324 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 P2RX4Q99571 388 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 NICN1Q9BSH3 213 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 PECRQ9BY49 303 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 TOLLIPQ9H0E2 274 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 SLA2Q9H6Q3 261 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 PARP11Q9NR21 331 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 LINC00527Q9UJ94 153 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 GAB2Q9UQC2 676 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 FOXA2Q9Y261 457 aaPredicted RBP8.16□□□□□ -1.1
CDCA3-208ENST00000540683 RBM7Q9Y580 266 aaKnown RBP8.16□□□□□ -1.1
CDCA3-208ENST00000540683 hCG_2014768A0A024R1R8 64 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 ZNF736B4DX44 427 aaPredicted RBP8.15□□□□□ -1.1
CDCA3-208ENST00000540683 FABP7O15540 132 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 FGF9P31371 208 aaPredicted RBP8.15□□□□□ -1.1
CDCA3-208ENST00000540683 CRIP2P52943 208 aaPredicted RBP8.15□□□□□ -1.1
CDCA3-208ENST00000540683 SCAND1P57086 179 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 CFHR3Q02985 330 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 ARFRP1Q13795 201 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 RTL8BQ17RB0 113 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 AKIRIN2Q53H80 203 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 C10orf99Q6UWK7 81 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 FAM131AQ6UXB0 335 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 OR5AN1Q8NGI8 311 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 ABHD5Q8WTS1 349 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 FLYWCH2Q96CP2 140 aaKnown RBP8.15□□□□□ -1.1
CDCA3-208ENST00000540683 GINS4Q9BRT9 223 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 SSR3Q9UNL2 185 aa8.15□□□□□ -1.1
CDCA3-208ENST00000540683 TMEM272A0A1B0GTI8 110 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 H0YJW9 148 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 H3BUA1 57 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 IGLV1-40P01703 118 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 HIST1H1DP16402 221 aaKnown RBP8.14□□□□□ -1.11
CDCA3-208ENST00000540683 DTYMKP23919 212 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 MAP2K4P45985 399 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 OR3A3P47888 321 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 RPS16P62249 146 aaKnown RBP8.14□□□□□ -1.11
CDCA3-208ENST00000540683 ZNF616Q08AN1 781 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 MOGAT2Q3SYC2 334 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 DEFB121Q5J5C9 76 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 HES5Q5TA89 166 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 UBE2UQ5VVX9 321 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 ZNF562Q6V9R5 426 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 ETV3LQ6ZN32 361 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 Q6ZS49 121 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 HSPB9Q9BQS6 159 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 AGMATQ9BSE5 352 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 C11orf54Q9H0W9 315 aaPredicted RBP8.14□□□□□ -1.11
CDCA3-208ENST00000540683 DCSTAMPQ9H295 470 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 VCX3AQ9NNX9 186 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 STUB1Q9UNE7 303 aa8.14□□□□□ -1.11
CDCA3-208ENST00000540683 A0A0A6YYD4 124 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 IGHV7-81A0A0B4J1V7 117 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 A0A0G2JLM5 398 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 FOXI3A8MTJ6 420 aaPredicted RBP8.13□□□□□ -1.11
CDCA3-208ENST00000540683 NOTOA8MTQ0 251 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 LDLRAD4O15165 306 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 ATP6V0E1O15342 81 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 CNIH1O95406 144 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 ATP6V1G2O95670 118 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 FCGR3AP08637 254 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 NHLRC4P0CG21 123 aaPredicted RBP8.13□□□□□ -1.11
CDCA3-208ENST00000540683 CT45A6P0DMU7 189 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 CT45A5P0DMU8 189 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 CT45A7P0DMV0 189 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 PSMB9P28065 219 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 RAB9AP51151 201 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 TMEM50BP56557 158 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 PRR20EP86478 221 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 PRR20CP86479 221 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 PRR20DP86480 221 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 PRR20BP86481 221 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 PRR20AP86496 221 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 CD69Q07108 199 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 TIMM50Q3ZCQ8 353 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 ACTBL2Q562R1 376 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 FAM209BQ5JX69 171 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 HIST2H2BDQ6DRA6 164 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 ZNF429Q86V71 674 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 PPP1R27Q86WC6 154 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 CROCCP3Q8IVE0 287 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 MINDY2Q8NBR6 621 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 OR11H1Q8NG94 326 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 OR1N2Q8NGR9 330 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms