RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 MPV17L2Q567V2 206 aa8.08□□□□□ -1.12
CTNNA1-243ENST00000540387 ASCL5Q7RTU5 278 aa8.08□□□□□ -1.12
CTNNA1-243ENST00000540387 LINC00346Q8IVM7 164 aa8.08□□□□□ -1.12
CTNNA1-243ENST00000540387 CA13Q8N1Q1 262 aa8.08□□□□□ -1.12
CTNNA1-243ENST00000540387 STXBP6Q8NFX7 210 aa8.08□□□□□ -1.12
CTNNA1-243ENST00000540387 OR10W1Q8NGF6 305 aa8.08□□□□□ -1.12
CTNNA1-243ENST00000540387 OR1B1Q8NGR6 318 aa8.08□□□□□ -1.12
CTNNA1-243ENST00000540387 MMABQ96EY8 250 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-243ENST00000540387 TM2D1Q9BX74 207 aa8.08□□□□□ -1.12
CTNNA1-243ENST00000540387 CENPMQ9NSP4 180 aa8.08□□□□□ -1.12
CTNNA1-243ENST00000540387 ANXA10Q9UJ72 324 aa8.08□□□□□ -1.12
CTNNA1-243ENST00000540387 PPIAL4EA0A075B759 164 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 PPIAL4CA0A0B4J2A2 164 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 SERINC4A6NH21 518 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 PPIAL4DF5H284 164 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 MLNRO43193 412 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 NXPH3O95157 252 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 PPIAL4FP0DN26 164 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 CCL4P13236 92 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 KITLGP21583 273 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 PSMB3P49720 205 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 PRRX1P54821 245 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 FMODQ06828 376 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 ZNF141Q15928 474 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 PRICKLE4Q2TBC4 344 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 ATG4DQ86TL0 474 aaPredicted RBP8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 BATF2Q8N1L9 274 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 TMEM52Q8NDY8 209 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 POLR1DQ9Y2S0 133 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 GTF3C1Q12789 2109 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 CHST1O43916 411 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 IGLC1P0CG04 106 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 STAG3L3P0CL85 134 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 PMCHP20382 165 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 MGAT2Q10469 447 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 TRIP6Q15654 476 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 DNM1P34Q6PK57 102 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 PIP4P1Q86T03 277 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 DEFB125Q8N687 156 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 DEFB124Q8NES8 71 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 OR2Y1Q8NGV0 311 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 SCGB1C1Q8TD33 95 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 GATAD1Q8WUU5 269 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 ATP6V0BQ99437 205 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 GPER1Q99527 375 aa8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 COA3Q9Y2R0 106 aaPredicted RBP8.07□□□□□ -1.12
CTNNA1-243ENST00000540387 TRAV8-6A0A0B4J262 113 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 ZNF850A8MQ14 1090 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 PNMTP11086 282 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 SCGB1A1P11684 91 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 NPBWR2P48146 333 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 PSG4Q00888 419 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 DHRS13Q6UX07 377 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 C6orf201Q7Z4U5 140 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 HAPLN4Q86UW8 402 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 C5orf17Q8NAS9 161 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 NEUROG1Q92886 237 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 GNB4Q9HAV0 340 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 LYRM4Q9HD34 91 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 PNO1Q9NRX1 252 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 SLC39A9Q9NUM3 307 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 FAM206AQ9NX38 181 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 ABI3Q9P2A4 366 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 RARRES3Q9UL19 164 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 PSG11Q9UQ72 335 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 CEP250Q9BV73 2442 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 C1QTNF9BB2RNN3 333 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 PLA2G5P39877 138 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 PAX9P55771 341 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 RELBQ01201 579 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 ACKR1Q16570 336 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 STUMQ69YW2 141 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 LCN12Q6JVE5 192 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 GATSQ8NAP1 163 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 OR4C3Q8NH37 302 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 ZC2HC1AQ96GY0 325 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 ABHD14BQ96IU4 210 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 SPIN2AQ99865 258 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 SPIN2BQ9BPZ2 258 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 PBOV1Q9GZY1 135 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 WASHC3Q9Y3C0 194 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 TRAV26-1A0A087WT03 109 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 H0YIG0 161 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 H3BP45 60 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 HMGB3O15347 200 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 ADAM20O43506 726 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 C1QTNF9P0C862 333 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 CTSSP25774 331 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 RRADP55042 308 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 TMEM267Q0VDI3 215 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 PSG3Q16557 428 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 HIST3H3Q16695 136 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 DMRTC1Q5HYR2 192 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 BVES-AS1Q5T3Y7 98 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 IGF2-ASQ6U949 168 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 CBLN3Q6UW01 205 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 C1QL2Q7Z5L3 287 aa8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 PSMG3Q9BT73 122 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-243ENST00000540387 NECAP2Q9NVZ3 263 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms