RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ZNF891A8MT65 544 aaPredicted RBP11.16□□□□□ -0.62
UBE3B-209ENST00000539584 SIRPB1O00241 398 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 MDKP21741 143 aaPredicted RBP11.16□□□□□ -0.62
UBE3B-209ENST00000539584 EIF4EBP1Q13541 118 aaPredicted RBP11.16□□□□□ -0.62
UBE3B-209ENST00000539584 ACTL10Q5JWF8 245 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 FBXW9Q5XUX1 488 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 SLC35E4Q6ICL7 350 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 ZNF66Q6ZN08 573 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 BEND4Q6ZU67 534 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 BCL2L2Q92843 193 aaPredicted RBP11.16□□□□□ -0.62
UBE3B-209ENST00000539584 RPUSD4Q96CM3 377 aaKnown RBP11.16□□□□□ -0.62
UBE3B-209ENST00000539584 TAAR6Q96RI8 345 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 C2orf88Q9BSF0 95 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 TMPRSS2O15393 492 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 LILRA1O75019 489 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 NXPH2O95156 264 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 IDH3GP51553 393 aaPredicted RBP11.16□□□□□ -0.62
UBE3B-209ENST00000539584 TAS2R60P59551 318 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 RAB4BP61018 213 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 FFAR4Q5NUL3 377 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 PRR18Q8N4B5 295 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 OR4F5Q8NH21 305 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 DTD1Q8TEA8 209 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 OR4F4Q96R69 305 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 NPCDR1Q9BY65 106 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 OR6C3Q9NZP0 311 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 LOXL2Q9Y4K0 774 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 FAM90A9PA6NNJ1 464 aa11.15□□□□□ -0.62
UBE3B-209ENST00000539584 A8MWP6 167 aa11.15□□□□□ -0.62
UBE3B-209ENST00000539584 MPDU1O75352 247 aa11.15□□□□□ -0.62
UBE3B-209ENST00000539584 GYPAP02724 150 aa11.15□□□□□ -0.62
UBE3B-209ENST00000539584 NINJ1Q92982 152 aa11.15□□□□□ -0.62
UBE3B-209ENST00000539584 HES4Q9HCC6 221 aa11.15□□□□□ -0.62
UBE3B-209ENST00000539584 SDK1Q7Z5N4 2213 aa11.15□□□□□ -0.62
UBE3B-209ENST00000539584 ODAMA1E959 279 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 C1QTNF9BB2RNN3 333 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 F6UZH7 168 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 SLC31A2O15432 143 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 IL18BPO95998 194 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 MT-CO3P00414 261 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 JMJD7P0C870 316 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 MPLP40238 635 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 MAGEA5P43359 124 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 NUBP1P53384 320 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 RPP30P78346 268 aaKnown RBP11.14□□□□□ -0.63
UBE3B-209ENST00000539584 OR1C1Q15619 314 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 TIPARPQ7Z3E1 657 aaKnown RBP11.14□□□□□ -0.63
UBE3B-209ENST00000539584 TMEM251Q8N6I4 163 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 HSD17B10Q99714 261 aaKnown RBP11.14□□□□□ -0.63
UBE3B-209ENST00000539584 SPRY4Q9C004 299 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 SLC25A22Q9H936 323 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 VCANP13611 3396 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 IQCF6A8MYZ5 107 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 C21orf140B9A014 251 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 MLNRO43193 412 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 HAND1O96004 215 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 KRASP01116 189 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 CD55P08174 381 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 CELA3AP09093 270 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 PLGLB1Q02325 96 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 FOXL1Q12952 345 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 IQCJQ1A5X6 159 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 ZNF766Q5HY98 468 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 H2BFWTQ7Z2G1 175 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 MDP1Q86V88 176 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 PRR7Q8TB68 274 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 RHOVQ96L33 236 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 OR2D2Q9H210 308 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 TP53TG5Q9Y2B4 290 aa11.14□□□□□ -0.63
UBE3B-209ENST00000539584 KLF13Q9Y2Y9 288 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-209ENST00000539584 A0A1W2PPQ1 181 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 WISP2O76076 250 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 TDGF1P13385 188 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 GZMHP20718 246 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 TUBG1P23258 451 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 CDC34P49427 236 aaPredicted RBP11.13□□□□□ -0.63
UBE3B-209ENST00000539584 ERVS71-1P61550 626 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 PPP1CBP62140 327 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 AARDQ4LEZ3 155 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 TRAT1Q6PIZ9 186 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 FAM180AQ6UWF9 173 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 WDR86Q86TI4 376 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 PCGF1Q9BSM1 259 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 NDUFAF3Q9BU61 184 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 TUBG2Q9NRH3 451 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 KCNIP2Q9NS61 270 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 WASF3Q9UPY6 502 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 KMT2EQ8IZD2 1858 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.13□□□□□ -0.63
UBE3B-209ENST00000539584 C11orf94C9JXX5 98 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 KLRC4-KLRK1H3BQV0 150 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 SMPD2O60906 423 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 G6PCP35575 357 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 TGFBR3Q03167 851 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 LURAP1Q96LR2 239 aa11.13□□□□□ -0.63
UBE3B-209ENST00000539584 LAMA1P25391 3075 aa11.12□□□□□ -0.63
UBE3B-209ENST00000539584 IFNL4K9M1U5 179 aa11.12□□□□□ -0.63
UBE3B-209ENST00000539584 CDIPTO14735 213 aa11.12□□□□□ -0.63
UBE3B-209ENST00000539584 PAGE4O60829 102 aa11.12□□□□□ -0.63
UBE3B-209ENST00000539584 RAMP3O60896 148 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms