RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 GGCTO75223 188 aaKnown RBP8.13□□□□□ -1.11
CDH13-204ENST00000539548 CER1O95813 267 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 COX5AP20674 150 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 SRP14P37108 136 aaKnown RBP8.13□□□□□ -1.11
CDH13-204ENST00000539548 MAGEA5P43359 124 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 ERVS71-1P61550 626 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 EIF4EBP1Q13541 118 aaPredicted RBP8.13□□□□□ -1.11
CDH13-204ENST00000539548 VWC2Q2TAL6 325 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 LBHQ53QV2 105 aaPredicted RBP8.13□□□□□ -1.11
CDH13-204ENST00000539548 ABHD17BQ5VST6 288 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 UNQ6494/PRO21346Q6UXR6 183 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 ZNF66Q6ZN08 573 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 MCEMP1Q8IX19 187 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 NECAP1Q8NC96 275 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 OR4F5Q8NH21 305 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 MEGF10Q96KG7 1140 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 OR4F4Q96R69 305 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 PCGF1Q9BSM1 259 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 TTTY12Q9BZ98 90 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 OR51B6Q9H340 312 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 SLC25A22Q9H936 323 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 KCNIP1Q9NZI2 227 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 COL27A1Q8IZC6 1860 aaPredicted RBP8.13□□□□□ -1.11
CDH13-204ENST00000539548 A0A1B0GV90 55 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 FAM166BA8MTA8 275 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 J3QW42 95 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 HMGB3O15347 200 aaKnown RBP8.12□□□□□ -1.11
CDH13-204ENST00000539548 SLC31A2O15432 143 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 RAMP3O60896 148 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 KRASP01116 189 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 GYPAP02724 150 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 TYMSP04818 313 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 NUBP1P53384 320 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 FFAR4Q5NUL3 377 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 MDP1Q86V88 176 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 CISD2Q8N5K1 135 aaKnown RBP8.12□□□□□ -1.11
CDH13-204ENST00000539548 OR10P1Q8NGE3 313 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 OR2T10Q8NGZ9 312 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 HLA-CQ95604 372 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 RAB24Q969Q5 203 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 NEIL1Q96FI4 390 aaPredicted RBP8.12□□□□□ -1.11
CDH13-204ENST00000539548 NOL4LQ96MY1 436 aaPredicted RBP8.12□□□□□ -1.11
CDH13-204ENST00000539548 CIB3Q96Q77 187 aaPredicted RBP8.12□□□□□ -1.11
CDH13-204ENST00000539548 HES7Q9BYE0 225 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 ODAMA1E959 279 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 A8MWP6 167 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 RAB29O14966 203 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 NXPH2O95156 264 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 IL18BPO95998 194 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 TUBG1P23258 451 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 G6PCP35575 357 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 RPL30P62888 115 aaKnown RBP8.12□□□□□ -1.11
CDH13-204ENST00000539548 ZXDAP98168 799 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 ACOT6Q3I5F7 207 aaPredicted RBP8.12□□□□□ -1.11
CDH13-204ENST00000539548 ACTL10Q5JWF8 245 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 SPATA46Q5T0L3 261 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 TMEM251Q8N6I4 163 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 TCTEX1D1Q8N7M0 179 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 GATAD1Q8WUU5 269 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 NANOS1Q8WY41 292 aaKnown RBP8.12□□□□□ -1.11
CDH13-204ENST00000539548 ZPBPQ9BS86 351 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 LRFN3Q9BTN0 628 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 ELOVL1Q9BW60 279 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 OR6C3Q9NZP0 311 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 CLN8Q9UBY8 286 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 LOXL2Q9Y4K0 774 aa8.12□□□□□ -1.11
CDH13-204ENST00000539548 TMEM30CPA0ZSE6 113 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 PAGE4O60829 102 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 CLDN14O95500 239 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 TDGF1P13385 188 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 BRWD1-AS2P59051 145 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 TAS2R60P59551 318 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 GNB2P62879 340 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 CATR1Q13166 79 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 P2RY6Q15077 328 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 OR1C1Q15619 314 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 ZNF709Q8N972 641 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 OR1L1Q8NH94 360 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 DTD1Q8TEA8 209 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 GALMQ96C23 342 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 C5orf30Q96GV9 206 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 C2orf88Q9BSF0 95 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 NPCDR1Q9BY65 106 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 SPRY4Q9C004 299 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 A0A1W2PPQ1 181 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 C17orf98A8MV24 154 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 C17orf112F2Z3M2 114 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 CDIPTO14735 213 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 PPP1CBP62140 327 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 LCN2P80188 198 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 TFF3Q07654 80 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 ZNF816Q0VGE8 651 aaPredicted RBP8.11□□□□□ -1.11
CDH13-204ENST00000539548 HNF4GQ14541 408 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 RTP5Q14D33 572 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 TBC1D28Q2M2D7 210 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 TMEM249Q2WGJ8 235 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 ZNF766Q5HY98 468 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 FBXW9Q5XUX1 488 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 SLC35E4Q6ICL7 350 aa8.11□□□□□ -1.11
CDH13-204ENST00000539548 MYPOPQ86VE0 399 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms