RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ACSM6Q6P461 480 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 CEACAM19Q7Z692 300 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 SBSPONQ8IVN8 264 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 ABHD5Q8WTS1 349 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 EDARADDQ8WWZ3 215 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 ARPC1AQ92747 370 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 RNF5Q99942 180 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 FAM103A1Q9BTL3 118 aaKnown RBP9.65□□□□□ -0.86
VAMP1-206ENST00000538970 C11orf54Q9H0W9 315 aaPredicted RBP9.65□□□□□ -0.86
VAMP1-206ENST00000538970 GHITMQ9H3K2 345 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 RIMS4Q9H426 269 aaPredicted RBP9.65□□□□□ -0.86
VAMP1-206ENST00000538970 PLEKHJ1Q9NW61 149 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 RNF150Q9ULK6 438 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 DNAH7Q8WXX0 4024 aa9.65□□□□□ -0.86
VAMP1-206ENST00000538970 FOXI3A8MTJ6 420 aaPredicted RBP9.64□□□□□ -0.87
VAMP1-206ENST00000538970 SOCS1O15524 211 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 PROP1O75360 226 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 IGHV3-11P01762 117 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 OR8U9P0C7N5 309 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 FRMD6-AS1P0C7T7 363 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 SNRPBP14678 240 aaKnown RBP9.64□□□□□ -0.87
VAMP1-206ENST00000538970 GP9P14770 177 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 ZBTB25P24278 435 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 TMEM267Q0VDI3 215 aaPredicted RBP9.64□□□□□ -0.87
VAMP1-206ENST00000538970 PSG5Q15238 335 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 SPHARQ15513 63 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 AKIRIN2Q53H80 203 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 ACTBL2Q562R1 376 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 UNQ5815/PRO19632Q6UWF5 114 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 PPP1R27Q86WC6 154 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 FAM89BQ8N5H3 189 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 OR6Q1Q8NGQ2 317 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 RCHY1Q96PM5 261 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 CLCC1Q96S66 551 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 GFI1Q99684 422 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 C12orf4Q9NQ89 552 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 METTL1Q9UBP6 276 aaKnown RBP9.64□□□□□ -0.87
VAMP1-206ENST00000538970 HSF4Q9ULV5 492 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 MGAT4AQ9UM21 535 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 HYDINQ4G0P3 5121 aa9.64□□□□□ -0.87
VAMP1-206ENST00000538970 LYSTQ99698 3801 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 SPDEFO95238 335 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 CA2P00918 260 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 IGKV1-16P04430 117 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 SCTP09683 121 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 ARSBP15848 533 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 CEACAM6P40199 344 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 TPPP2P59282 170 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 PITPNAQ00169 270 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 P2RY14Q15391 338 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 MED22Q15528 200 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 CASC10Q5T4H9 136 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 ZNF562Q6V9R5 426 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 OVCH2Q7RTZ1 564 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 ZNF383Q8NA42 475 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 DRAXINQ8NBI3 349 aaPredicted RBP9.63□□□□□ -0.87
VAMP1-206ENST00000538970 LFNGQ8NES3 379 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 MUC7Q8TAX7 377 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 PTX4Q96A99 478 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 RHOVQ96L33 236 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 MS4A10Q96PG2 267 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 URM1Q9BTM9 101 aaKnown RBP9.63□□□□□ -0.87
VAMP1-206ENST00000538970 SLA2Q9H6Q3 261 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 Q9N2K0 584 aa9.63□□□□□ -0.87
VAMP1-206ENST00000538970 IGKV1-6A0A0C4DH72 117 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 TRIM64CA6NLI5 447 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 PTGES3LE9PB15 166 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 SLC17A2O00624 439 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 HSPA12AO43301 675 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 HSPB1P04792 205 aaKnown RBP9.62□□□□□ -0.87
VAMP1-206ENST00000538970 TFAP2AP05549 437 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 CPEP16870 476 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 IRF3Q14653 427 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 LIPKQ5VXJ0 399 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 TMEM91Q6ZNR0 172 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 PDPNQ86YL7 162 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 UFD1Q92890 307 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 TMEM203Q969S6 136 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 FLYWCH2Q96CP2 140 aaKnown RBP9.62□□□□□ -0.87
VAMP1-206ENST00000538970 TSNAXQ99598 290 aaKnown RBP9.62□□□□□ -0.87
VAMP1-206ENST00000538970 VCXQ9H320 206 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 PLGRKTQ9HBL7 147 aa9.62□□□□□ -0.87
VAMP1-206ENST00000538970 LCE6AA0A183 80 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 TRGV3P03979 118 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 CD40LGP29965 261 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 TMEM50BP56557 158 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 LINC00205P59089 165 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 RPS25P62851 125 aaKnown RBP9.61□□□□□ -0.87
VAMP1-206ENST00000538970 SSBP2P81877 361 aaPredicted RBP9.61□□□□□ -0.87
VAMP1-206ENST00000538970 PLAC9Q5JTB6 97 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 HAPLN4Q86UW8 402 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 GRPEL2Q8TAA5 225 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 ARHGAP5-AS1Q96IT6 56 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 OR4C12Q96R67 309 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 PECRQ9BY49 303 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 RDH8Q9NYR8 311 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 ZNF221Q9UK13 617 aa9.61□□□□□ -0.87
VAMP1-206ENST00000538970 AK6Q9Y3D8 172 aaKnown RBP9.61□□□□□ -0.87
VAMP1-206ENST00000538970 TRDCB7Z8K6 153 aa9.6□□□□□ -0.87
VAMP1-206ENST00000538970 ARPC1BO15143 372 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms