RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 GLAP06280 429 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 MC5RP33032 325 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 PSG5Q15238 335 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 SMN1Q16637 294 aaKnown RBP10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 TTC23Q5W5X9 447 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 ZNF562Q6V9R5 426 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 TMPRSS11AQ6ZMR5 421 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 ZFP41Q8N8Y5 198 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 POC5Q8NA72 575 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 DRAXINQ8NBI3 349 aaPredicted RBP10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 OR5T1Q8NG75 326 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 CYGBQ8WWM9 190 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 GHSRQ92847 366 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 ABHD14BQ96IU4 210 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 OR14A2Q96R54 314 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 SLC23A1Q9UHI7 598 aa10.65□□□□□ -0.7
SMARCA4-206ENST00000538456 SHISA3A0PJX4 238 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 SLC22A1O15245 554 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 RBBP9O75884 186 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 LALBAP00709 142 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 TRBV12-3P01733 135 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 FSTP19883 344 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 FXYD3Q14802 87 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 HMGN3Q15651 99 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 Q499Y3 187 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 LY6G6FQ5SQ64 297 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 C6orf141Q5SZD1 244 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 Q8N402 240 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 ZNF555Q8NEP9 628 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 APH1BQ8WW43 257 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 CNBD2Q96M20 576 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 SULT4A1Q9BR01 284 aa10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 MRPS18AQ9NVS2 196 aaKnown RBP10.64□□□□□ -0.71
SMARCA4-206ENST00000538456 A0A0G2JLM5 398 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 OGG1O15527 345 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 SLC25A17O43808 307 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 GPX5O75715 221 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 IGKV1-16P04430 117 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 CSN3P07498 182 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 CPEP16870 476 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 CD81P60033 236 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 RPS11P62280 158 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 RNLSQ5VYX0 342 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 OR5AN1Q8NGI8 311 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 SETD6Q8TBK2 473 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 FAAP24Q9BTP7 215 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 CHMP1AQ9HD42 196 aaPredicted RBP10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 FGF20Q9NP95 211 aaPredicted RBP10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 BABAM2Q9NXR7 383 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 PCLOQ9Y6V0 5065 aa10.63□□□□□ -0.71
SMARCA4-206ENST00000538456 PNMA8CA0A1B0GUJ8 204 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 LOC100130705A0A1B0GUX0 176 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 TPPPO94811 219 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 CNIH1O95406 144 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 BRI3O95415 125 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 GNAO1P09471 354 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 LINC00205P59089 165 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 RPS16P62249 146 aaKnown RBP10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 DYRK1AQ13627 763 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 RPEL1Q2QD12 228 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 MOGAT2Q3SYC2 334 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 YIF1BQ5BJH7 314 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 C6orf201Q7Z4U5 140 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 LINC00476Q8WZB0 136 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 NEDD4LQ96PU5 975 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 TSNAXQ99598 290 aaKnown RBP10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 WFDC10AQ9H1F0 79 aa10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 PEF1Q9UBV8 284 aaKnown RBP10.62□□□□□ -0.71
SMARCA4-206ENST00000538456 TRBV5-7A0A0A0MS05 114 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 H3BUA1 57 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 SPDEFO95238 335 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 LY6G6CO95867 125 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 MYL12AP19105 171 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 DCKP27707 260 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 PJVKQ0ZLH3 352 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 LINC00322Q6ZN03 302 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 C8orf59Q8N0T1 100 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 SVOPQ8N4V2 548 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 DEFB125Q8N687 156 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 SETD9Q8NE22 299 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 BVESQ8NE79 360 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 PGLYRP3Q96LB9 341 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 RNF5Q99942 180 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 NEURL2Q9BR09 285 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 AGMATQ9BSE5 352 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 OR1A1Q9P1Q5 309 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 CLEC2DQ9UHP7 191 aa10.61□□□□□ -0.71
SMARCA4-206ENST00000538456 RBMY1BA6NDE4 496 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-206ENST00000538456 RBMY1EA6NEQ0 496 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-206ENST00000538456 WBP4O75554 376 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-206ENST00000538456 CD7P09564 240 aa10.6□□□□□ -0.71
SMARCA4-206ENST00000538456 RBMY1DP0C7P1 496 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-206ENST00000538456 APELAP0DMC3 54 aa10.6□□□□□ -0.71
SMARCA4-206ENST00000538456 SSBP2P81877 361 aaPredicted RBP10.6□□□□□ -0.71
SMARCA4-206ENST00000538456 TATDN3Q17R31 274 aa10.6□□□□□ -0.71
SMARCA4-206ENST00000538456 OR10K2Q6IF99 312 aa10.6□□□□□ -0.71
SMARCA4-206ENST00000538456 SRD5A3Q9H8P0 318 aa10.6□□□□□ -0.71
SMARCA4-206ENST00000538456 COA4Q9NYJ1 87 aa10.6□□□□□ -0.71
SMARCA4-206ENST00000538456 HERC2O95714 4834 aa10.59□□□□□ -0.71
SMARCA4-206ENST00000538456 OR2A4O95047 310 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms