RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 C17orf50Q8WW18 174 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 CAPSLQ8WWF8 208 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 ST6GALNAC6Q969X2 333 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 ZNF486Q96H40 463 aaPredicted RBP9.34□□□□□ -0.91
CDCA3-206ENST00000536241 S1PR3Q99500 378 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 MARVELD1Q9BSK0 173 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 YAE1D1Q9NRH1 226 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 DPM3Q9P2X0 92 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 IGHV1-69DA0A0B4J2H0 117 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 LEUTXA8MZ59 168 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 M0R1X1 148 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 NPFFO15130 113 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 IGHV1-69P01742 117 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 VSIG10L2P0DP72 767 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 PAX6P26367 422 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 REG1BP48304 166 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 GPR157Q5UAW9 335 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 RUSC1-AS1Q66K80 236 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 BRD3OSQ6XYD6 125 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 SLC25A42Q86VD7 318 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 CMTM1Q8IZ96 169 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 PIP4P2Q8N4L2 257 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 RTN4IP1Q8WWV3 396 aaPredicted RBP9.34□□□□□ -0.91
CDCA3-206ENST00000536241 TMEM230Q96A57 120 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 TMUB1Q9BVT8 246 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 SLC2A9Q9NRM0 540 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 HILPDAQ9Y5L2 63 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 ACANP16112 2415 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 LINC00473A8K010 186 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 MPPED1O15442 326 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 LY6G6DO95868 133 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 CT45A6P0DMU7 189 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 CT45A5P0DMU8 189 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 CT45A7P0DMV0 189 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 IL3RAP26951 378 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 DUTP33316 252 aaKnown RBP9.33□□□□□ -0.92
CDCA3-206ENST00000536241 ZNF137PP52743 207 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 RPL30P62888 115 aaKnown RBP9.33□□□□□ -0.92
CDCA3-206ENST00000536241 EIF4EBP1Q13541 118 aaPredicted RBP9.33□□□□□ -0.92
CDCA3-206ENST00000536241 SSX2Q16385 188 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 TMEM128Q5BJH2 165 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 GLDNQ6ZMI3 551 aaPredicted RBP9.33□□□□□ -0.92
CDCA3-206ENST00000536241 ZNF833PQ6ZTB9 187 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 TBC1D26Q86UD7 250 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 MINDY2Q8NBR6 621 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.33□□□□□ -0.92
CDCA3-206ENST00000536241 RBMXL1Q96E39 390 aaKnown RBP9.33□□□□□ -0.92
CDCA3-206ENST00000536241 AJUBAQ96IF1 538 aa9.33□□□□□ -0.92
CDCA3-206ENST00000536241 ALX4Q9H161 411 aaPredicted RBP9.33□□□□□ -0.92
CDCA3-206ENST00000536241 AMMECR1Q9Y4X0 333 aaPredicted RBP9.33□□□□□ -0.92
CDCA3-206ENST00000536241 SOX21Q9Y651 276 aaPredicted RBP9.33□□□□□ -0.92
CDCA3-206ENST00000536241 CREBBPQ92793 2442 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 TEX13DA0A0J9YY54 714 aaPredicted RBP9.32□□□□□ -0.92
CDCA3-206ENST00000536241 PEX14O75381 377 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 GAPDHP04406 335 aaKnown RBP9.32□□□□□ -0.92
CDCA3-206ENST00000536241 OR4E1P0C645 316 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 S100GP29377 79 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 SAA4P35542 130 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 RND3P61587 244 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 DHODHQ02127 395 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 MSMO1Q15800 293 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 SP6Q3SY56 376 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 MIDNQ504T8 468 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 TPTE2P1Q5T6R2 138 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 MINOS1Q5TGZ0 78 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 ZNF66Q6ZN08 573 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 SGPP2Q8IWX5 399 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 DYNAPQ8N1N2 210 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 CCDC71LQ8N9Z2 235 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 OR51H1Q8NH63 302 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 NANPQ8TBE9 248 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 RPEQ96AT9 228 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 MALSU1Q96EH3 234 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 TBL2Q9Y4P3 447 aaKnown RBP9.32□□□□□ -0.92
CDCA3-206ENST00000536241 MINOS1-NBL1R4GNA1 71 aa9.32□□□□□ -0.92
CDCA3-206ENST00000536241 ZNF469Q96JG9 3925 aaPredicted RBP9.31□□□□□ -0.92
CDCA3-206ENST00000536241 C3orf85A0A1B0GTC6 90 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 CRYM-AS1A6NIL9 109 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 A8MV72 311 aaPredicted RBP9.31□□□□□ -0.92
CDCA3-206ENST00000536241 DHFRP00374 187 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 FOSL1P15407 271 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 EPHA1P21709 976 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 CEACAM3P40198 252 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 MECP2P51608 486 aaKnown RBP9.31□□□□□ -0.92
CDCA3-206ENST00000536241 RAG2P55895 527 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 SUPT4H1P63272 117 aaKnown RBP9.31□□□□□ -0.92
CDCA3-206ENST00000536241 PPP1R1AQ13522 171 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 C4orf46Q504U0 113 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 MOB3BQ86TA1 216 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 TGIF2LXQ8IUE1 241 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 ZNF383Q8NA42 475 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 OR52B4Q8NGK2 314 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 HSD17B10Q99714 261 aaKnown RBP9.31□□□□□ -0.92
CDCA3-206ENST00000536241 NABP2Q9BQ15 211 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 SEC22CQ9BRL7 303 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 MRPL20Q9BYC9 149 aaKnown RBP9.31□□□□□ -0.92
CDCA3-206ENST00000536241 NUP50Q9UKX7 468 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 KCNIP3Q9Y2W7 256 aa9.31□□□□□ -0.92
CDCA3-206ENST00000536241 FLNAP21333 2647 aaKnown RBP9.31□□□□□ -0.92
CDCA3-206ENST00000536241 TEX15Q9BXT5 2789 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms