RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 MSL2Q9HCI7 577 aa15.22■□□□□ 0.03
RAB40C-203ENST00000535977 CST7O76096 145 aa15.21■□□□□ 0.03
RAB40C-203ENST00000535977 NKX2-1P43699 371 aaPredicted RBP15.21■□□□□ 0.03
RAB40C-203ENST00000535977 DYNLT3P51808 116 aa15.21■□□□□ 0.03
RAB40C-203ENST00000535977 FOXG1P55316 489 aaPredicted RBP15.21■□□□□ 0.03
RAB40C-203ENST00000535977 TMEM217Q8N7C4 229 aa15.21■□□□□ 0.03
RAB40C-203ENST00000535977 PROB1E7EW31 1015 aa15.21■□□□□ 0.02
RAB40C-203ENST00000535977 NGFP01138 241 aa15.21■□□□□ 0.02
RAB40C-203ENST00000535977 SCTP09683 121 aa15.21■□□□□ 0.02
RAB40C-203ENST00000535977 CD33P20138 364 aa15.21■□□□□ 0.02
RAB40C-203ENST00000535977 SELENOHQ8IZQ5 122 aaKnown RBP15.21■□□□□ 0.02
RAB40C-203ENST00000535977 A0A1B0GUS0 222 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 ZNF503-AS2A6NEH8 195 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 TNFSF13O75888 250 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 UCP1P25874 307 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 ACOT6Q3I5F7 207 aaPredicted RBP15.2■□□□□ 0.02
RAB40C-203ENST00000535977 LEMD1Q68G75 181 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 TOMM20LQ6UXN7 152 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 TMEM256Q8N2U0 113 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 TMEM252Q8N6L7 170 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 OR1K1Q8NGR3 316 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 ZCCHC14Q8WYQ9 949 aaKnown RBP15.2■□□□□ 0.02
RAB40C-203ENST00000535977 HIPK2Q9H2X6 1198 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 ZNF552Q9H707 407 aaPredicted RBP15.2■□□□□ 0.02
RAB40C-203ENST00000535977 PLEKHF2Q9H8W4 249 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 SHANK1Q9Y566 2161 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 RIF1Q5UIP0 2472 aaKnown RBP15.2■□□□□ 0.02
RAB40C-203ENST00000535977 C20orf202A1L168 122 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 SLC22A20A6NK97 555 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 CCL25O15444 150 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 VDAC1P21796 283 aa15.2■□□□□ 0.02
RAB40C-203ENST00000535977 CEACAM8P31997 349 aaPredicted RBP15.2■□□□□ 0.02
RAB40C-203ENST00000535977 CNN1P51911 297 aaKnown RBP15.2■□□□□ 0.02
RAB40C-203ENST00000535977 YLPM1P49750 1951 aaKnown RBP15.19■□□□□ 0.02
RAB40C-203ENST00000535977 NKX2-6A6NCS4 301 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 NUPR1O60356 82 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 BCL2L2Q92843 193 aaPredicted RBP15.19■□□□□ 0.02
RAB40C-203ENST00000535977 OR5B12Q96R08 314 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 PPIAL4AQ9Y536 164 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 ZFHX2Q9C0A1 2572 aaPredicted RBP15.19■□□□□ 0.02
RAB40C-203ENST00000535977 TRAV1-1A0A0B4J248 108 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 LRP5LA4QPB2 252 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 HNF1AP20823 631 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 SELENOTP62341 195 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 ZNF818PQ6ZRF7 136 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 FAM58AQ8N1B3 248 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 GAPTQ8N292 157 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 OR5D13Q8NGL4 314 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 MAGT1Q9H0U3 335 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 AURKAIP1Q9NWT8 199 aaPredicted RBP15.19■□□□□ 0.02
RAB40C-203ENST00000535977 CRIM1Q9NZV1 1036 aa15.19■□□□□ 0.02
RAB40C-203ENST00000535977 H0Y980 276 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 H7BYZ3 331 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 CDX4O14627 284 aaPredicted RBP15.18■□□□□ 0.02
RAB40C-203ENST00000535977 SYNGR1O43759 233 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 SSSCA1O60232 199 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 LCN15Q6UWW0 184 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 ODF3L1Q8IXM7 274 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 BATF2Q8N1L9 274 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 PRSS50Q9UI38 385 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 PAM16Q9Y3D7 125 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 CFAP54Q96N23 3096 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 WNT2P09544 360 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 FGF8P55075 233 aaPredicted RBP15.18■□□□□ 0.02
RAB40C-203ENST00000535977 MRPL49Q13405 166 aaKnown RBP15.18■□□□□ 0.02
RAB40C-203ENST00000535977 RTP5Q14D33 572 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 ZNF787Q6DD87 383 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 DPPA3Q6W0C5 159 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 H1FOOQ8IZA3 346 aaPredicted RBP15.18■□□□□ 0.02
RAB40C-203ENST00000535977 MRPL30Q8TCC3 161 aaKnown RBP15.18■□□□□ 0.02
RAB40C-203ENST00000535977 LRFN3Q9BTN0 628 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 LYRM2Q9NU23 88 aaPredicted RBP15.18■□□□□ 0.02
RAB40C-203ENST00000535977 OR6C3Q9NZP0 311 aa15.18■□□□□ 0.02
RAB40C-203ENST00000535977 NKX6-3A6NJ46 265 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 TNFSF15O95150 251 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 MDH2P40926 338 aaKnown RBP15.17■□□□□ 0.02
RAB40C-203ENST00000535977 PTTG1IPP53801 180 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 CST9LP1Q5W188 147 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 Q8IYB0 196 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 HS3ST6Q96QI5 342 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 NAT8Q9UHE5 227 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 FREM1Q5H8C1 2179 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 CEBPZOSA8MTT3 80 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 J3QT63 122 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 SLC25A6P12236 298 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 BAXQ07812 192 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 WDYHV1Q96HA8 205 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 SLC35E1Q96K37 410 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 SMIM7Q9BQ49 75 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 OR51I2Q9H344 312 aa15.17■□□□□ 0.02
RAB40C-203ENST00000535977 TRGV5A0A0B4J1U4 118 aa15.16■□□□□ 0.02
RAB40C-203ENST00000535977 SLC33A1O00400 549 aaPredicted RBP15.16■□□□□ 0.02
RAB40C-203ENST00000535977 NXPH2O95156 264 aa15.16■□□□□ 0.02
RAB40C-203ENST00000535977 HRASP01112 189 aa15.16■□□□□ 0.02
RAB40C-203ENST00000535977 ID3Q02535 119 aa15.16■□□□□ 0.02
RAB40C-203ENST00000535977 TBC1D28Q2M2D7 210 aa15.16■□□□□ 0.02
RAB40C-203ENST00000535977 NMSQ5H8A3 153 aa15.16■□□□□ 0.02
RAB40C-203ENST00000535977 TEX43Q6ZNM6 134 aa15.16■□□□□ 0.02
RAB40C-203ENST00000535977 MOB1BQ7L9L4 216 aa15.16■□□□□ 0.02
RAB40C-203ENST00000535977 TMEM178AQ8NBL3 297 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms