RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 TRDCB7Z8K6 153 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 CCL24O00175 119 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 XRCC3O43542 346 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 YPEL1O60688 119 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 GSTP1P09211 210 aaKnown RBP9.85□□□□□ -0.83
USF1-211ENST00000534633 CD3GP09693 182 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 GSTT2P0CG29 244 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 GSTT2BP0CG30 244 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 PPP1CCP36873 323 aaKnown RBP9.85□□□□□ -0.83
USF1-211ENST00000534633 HLA-DRB3P79483 266 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 PNLIPRP3Q17RR3 467 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 Q3ZCU0 254 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 UBE2NLQ5JXB2 153 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 SLC25A48Q6ZT89 311 aaKnown RBP9.85□□□□□ -0.83
USF1-211ENST00000534633 MOB3BQ86TA1 216 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 Q8N6K4 173 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 NUDCD2Q8WVJ2 157 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 GALMQ96C23 342 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 RAX2Q96IS3 184 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 EAF1Q96JC9 268 aaPredicted RBP9.85□□□□□ -0.83
USF1-211ENST00000534633 DUX3Q96PT4 197 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 YPEL2Q96QA6 119 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 BCL7BQ9BQE9 202 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 AUNIPQ9H7T9 357 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 OR1A1Q9P1Q5 309 aa9.85□□□□□ -0.83
USF1-211ENST00000534633 A0A0A6YYH2 397 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 A6NJ64 397 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 LINC01548A6NM66 108 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 NCBP2LA6PVI3 153 aaKnown RBP9.84□□□□□ -0.83
USF1-211ENST00000534633 HPGDSO60760 199 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 SCGNO76038 276 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 HLA-DQB1P01920 261 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 ELK1P19419 428 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 GPR12P47775 334 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 CDX1P47902 265 aaPredicted RBP9.84□□□□□ -0.83
USF1-211ENST00000534633 SRSF7Q16629 238 aaKnown RBP eCLIP9.84□□□□□ -0.83
USF1-211ENST00000534633 TMEM30BQ3MIR4 351 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 IGSF11Q5DX21 431 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 CXorf66Q5JRM2 361 aaPredicted RBP9.84□□□□□ -0.83
USF1-211ENST00000534633 LY6G6FQ5SQ64 297 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 C9orf66Q5T8R8 295 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 STEAP3Q658P3 488 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 Q6ZS49 121 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 MOB1BQ7L9L4 216 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 ODF3L1Q8IXM7 274 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 RNF152Q8N8N0 203 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 Q8N9W7 124 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 OR2T10Q8NGZ9 312 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 OR8U1Q8NH10 309 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 IL1F10Q8WWZ1 152 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 ACOT12Q8WYK0 555 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 RBMXL1Q96E39 390 aaKnown RBP9.84□□□□□ -0.83
USF1-211ENST00000534633 S100A16Q96FQ6 103 aaKnown RBP9.84□□□□□ -0.83
USF1-211ENST00000534633 CMTM3Q96MX0 182 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 AGMATQ9BSE5 352 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 MIXL1Q9H2W2 232 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 GNG12Q9UBI6 72 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 JPT1Q9UK76 154 aa9.84□□□□□ -0.83
USF1-211ENST00000534633 CTDSP2O14595 271 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 APOA1P02647 267 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 RPLP1P05386 114 aaKnown RBP9.83□□□□□ -0.84
USF1-211ENST00000534633 ELANEP08246 267 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 DTYMKP23919 212 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 CD1BP29016 333 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 CEACAM6P40199 344 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 REG1BP48304 166 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 RAB25P57735 213 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 FOXE3Q13461 319 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 ARFRP1Q13795 201 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 KIR2DS1Q14954 304 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 ARL6IP1Q15041 203 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 DEFB136Q30KP8 78 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 GVQW1Q8N7I0 195 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 OR5M8Q8NGP6 311 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 ST6GALNAC5Q9BVH7 336 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 SLIRPQ9GZT3 109 aaKnown RBP9.83□□□□□ -0.84
USF1-211ENST00000534633 RAB9BQ9NP90 201 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 DIABLOQ9NR28 239 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 LSM4Q9Y4Z0 139 aaKnown RBP9.83□□□□□ -0.84
USF1-211ENST00000534633 U3KQK5 164 aa9.83□□□□□ -0.84
USF1-211ENST00000534633 TRBV6-7A0A0A0MS04 114 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 IGHV3-72A0A0B4J1Y9 119 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 FABP7O15540 132 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 PROP1O75360 226 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 IL3RAP26951 378 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 LUMP51884 338 aaPredicted RBP9.82□□□□□ -0.84
USF1-211ENST00000534633 ZNF137PP52743 207 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 TAS2R20P59543 309 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 OR8H1Q8NGG4 311 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 OR4A4PQ8NGN8 299 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 RTN4IP1Q8WWV3 396 aaPredicted RBP9.82□□□□□ -0.84
USF1-211ENST00000534633 S1PR3Q99500 378 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 RASL11BQ9BPW5 248 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 ZNF251Q9BRH9 671 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 CABLES2Q9BTV7 478 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 TOLLIPQ9H0E2 274 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 C11orf54Q9H0W9 315 aaPredicted RBP9.82□□□□□ -0.84
USF1-211ENST00000534633 MGAT4AQ9UM21 535 aa9.82□□□□□ -0.84
USF1-211ENST00000534633 SORL1Q92673 2214 aa9.81□□□□□ -0.84
USF1-211ENST00000534633 ST8SIA5O15466 376 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms