RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 SRRM4A7MD48 611 aaKnown RBP3.95□□□□□ -1.78
USH1C-210ENST00000534556 LINC00473A8K010 186 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 J3QRK9 145 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 M0QZK8 103 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 PDCD5O14737 125 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 ARPC1BO15143 372 aaKnown RBP3.95□□□□□ -1.78
USH1C-210ENST00000534556 BET1O15155 118 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 ATP6V0E1O15342 81 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 FABP7O15540 132 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 RBMXL2O75526 392 aaKnown RBP3.95□□□□□ -1.78
USH1C-210ENST00000534556 IGLV2-23P01705 113 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 FCER2P06734 321 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 CRYGBP07316 175 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 OR8U9P0C7N5 309 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 MYL9P24844 172 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 PSMD7P51665 324 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 NCS1P62166 190 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 RPL23AP62750 156 aaKnown RBP3.95□□□□□ -1.78
USH1C-210ENST00000534556 RPL30P62888 115 aaKnown RBP3.95□□□□□ -1.78
USH1C-210ENST00000534556 PJVKQ0ZLH3 352 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 EIF4EBP1Q13541 118 aaPredicted RBP3.95□□□□□ -1.78
USH1C-210ENST00000534556 C5orf64Q2M2E5 130 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 ARSJQ5FYB0 599 aaPredicted RBP3.95□□□□□ -1.78
USH1C-210ENST00000534556 Q6ZS49 121 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 C8orf86Q6ZUL3 223 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 MOB1BQ7L9L4 216 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 TPRA1Q86W33 373 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 MRPL41Q8IXM3 137 aaKnown RBP3.95□□□□□ -1.78
USH1C-210ENST00000534556 H1FOOQ8IZA3 346 aaPredicted RBP3.95□□□□□ -1.78
USH1C-210ENST00000534556 LINC00482Q8N8I6 264 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 RNF152Q8N8N0 203 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 TSPAN14Q8NG11 270 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 OR2AK2Q8NG84 335 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 OR5AN1Q8NGI8 311 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 OR4A4PQ8NGN8 299 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 OR8U1Q8NH10 309 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 MYOZ3Q8TDC0 251 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 DDB2Q92466 427 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 FCGR1BQ92637 280 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 SNAPC3Q92966 411 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 PHF21AQ96BD5 680 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 RAX2Q96IS3 184 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 KCTD7Q96MP8 289 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 Q9H521 79 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 GNB4Q9HAV0 340 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 LIN7CQ9NUP9 197 aaKnown RBP3.95□□□□□ -1.78
USH1C-210ENST00000534556 SDHAF2Q9NX18 166 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 RHBDL2Q9NX52 303 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 SSR3Q9UNL2 185 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 TSSC4Q9Y5U2 329 aaPredicted RBP3.95□□□□□ -1.78
USH1C-210ENST00000534556 WSB1Q9Y6I7 421 aa3.95□□□□□ -1.78
USH1C-210ENST00000534556 STAB2Q8WWQ8 2551 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 TRAV18A0A075B6X5 111 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 WI2-2373I1.2A0A1W2PRP0 233 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 MEIS3P1A6NDR6 274 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 AP4M1O00189 453 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 RRHO14718 337 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 RAB29O14966 203 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 NBR2O15453 112 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 TXNL1O43396 289 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 PEX14O75381 377 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 IGLV1-40P01703 118 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 IGHG4P01861 327 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 HLA-DRB1P01911 266 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 IGF1P05019 195 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 NFYAP23511 347 aaPredicted RBP3.94□□□□□ -1.78
USH1C-210ENST00000534556 ZBTB25P24278 435 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 IL3RAP26951 378 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 PSMB8P28062 276 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 SOX6P35712 828 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 THBS3P49746 956 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 ARHGDIBP52566 201 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 CRIP2P52943 208 aaPredicted RBP3.94□□□□□ -1.78
USH1C-210ENST00000534556 VBP1P61758 197 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 GNB1P62873 340 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 CX3CL1P78423 397 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 ARFRP1Q13795 201 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 PSG5Q15238 335 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 MMDQ15546 238 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 IDNKQ5T6J7 187 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 HACD4Q5VWC8 232 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 FOXB2Q5VYV0 432 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 FAM71F2Q6NXP2 309 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 OR13F1Q8NGS4 319 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 EDARADDQ8WWZ3 215 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 AKR1E2Q96JD6 320 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 P2RX4Q99571 388 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 LYSTQ99698 3801 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 FAM103A1Q9BTL3 118 aaKnown RBP3.94□□□□□ -1.78
USH1C-210ENST00000534556 FUNDC2Q9BWH2 189 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 ALX4Q9H161 411 aaPredicted RBP3.94□□□□□ -1.78
USH1C-210ENST00000534556 OR2D2Q9H210 308 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 OR51J1Q9H342 316 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 RIMS4Q9H426 269 aaPredicted RBP3.94□□□□□ -1.78
USH1C-210ENST00000534556 AUNIPQ9H7T9 357 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 AURKAIP1Q9NWT8 199 aaPredicted RBP3.94□□□□□ -1.78
USH1C-210ENST00000534556 PIPOXQ9P0Z9 390 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 ABRACLQ9P1F3 81 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 NUBP2Q9Y5Y2 271 aa3.94□□□□□ -1.78
USH1C-210ENST00000534556 TENM2Q9NT68 2774 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms