RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	RGP1	Q92546	391 aa	Predicted RBP	2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TMEM54	Q969K7	222 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	MALSU1	Q96EH3	234 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SH3GL3	Q99963	347 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ULBP2	Q9BZM5	246 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	IQCG	Q9H095	443 aa	Known RBP	2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	NCOR1P1	Q9H4R4	102 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TUBG2	Q9NRH3	451 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	NACA	E9PAV3	2078 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	GNG14	A0A1W2PPG7	69 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	C5orf49	A4QMS7	147 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	MRPS12	O15235	138 aa	Known RBP	2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	EIF3G	O75821	320 aa	Known RBP eCLIP	2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	NDUFB2	O95178	105 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	IGLV1-47	P01700	117 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	GYPA	P02724	150 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	GIP	P09681	153 aa	Predicted RBP	2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR8U9	P0C7N5	309 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ELK1	P19419	428 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	BMI1	P35226	326 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	AQP2	P41181	271 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	IDH2	P48735	452 aa	Known RBP	2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	GDI2	P50395	445 aa	Known RBP	2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	RORC	P51449	518 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	UGT2B15	P54855	530 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	FGF8	P55075	233 aa	Predicted RBP	2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	LYZ	P61626	148 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	UAP1	Q16222	522 aa	Predicted RBP	2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PABPC1L2A	Q5JQF8	200 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CLEC12A	Q5QGZ9	265 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	LINC00596	Q86U02	117 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	LRRC8A	Q8IWT6	810 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	NPB	Q8NG41	125 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR4A4P	Q8NGN8	299 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR6N1	Q8NGY5	312 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR13G1	Q8NGZ3	307 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	RHEBL1	Q8TAI7	183 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CDS1	Q92903	461 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SGK3	Q96BR1	496 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CHMP6	Q96FZ7	201 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SLC35E1	Q96K37	410 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR4C12	Q96R67	309 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	STAC	Q99469	402 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	DERL2	Q9GZP9	239 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TAS2R7	Q9NYW3	318 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	RNF11	Q9Y3C5	154 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442	COMMD3-BMI1	R4GMX3	469 aa		2.91	□□□□□ -1.94
ECHDC1-223	ENST00000534442		F5H5P2	479 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442		M0QZK8	103 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	SLC31A2	O15432	143 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	NDUFB3	O43676	98 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	CD74	P04233	296 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	GKN3P	P0CG01	181 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	CDKN1B	P46527	198 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	RWDD2B	P57060	319 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	OR12D2	P58182	307 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	LIPE	Q05469	1076 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	ZNF616	Q08AN1	781 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	ECH1	Q13011	328 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	AQP6	Q13520	282 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	IL18	Q14116	193 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	OR4D1	Q15615	310 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	ZNF141	Q15928	474 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	KCTD19	Q17RG1	926 aa	Predicted RBP	2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	LRRC10	Q5BKY1	277 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	HHAT	Q5VTY9	493 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	C22orf42	Q6IC83	251 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	ANKRD26P1	Q6NSI1	321 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	REEP3	Q6NUK4	255 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	C4orf22	Q6V702	233 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	SLC30A8	Q8IWU4	369 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	PGAM4	Q8N0Y7	254 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	PDIK1L	Q8N165	341 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	OR4K5	Q8NGD3	323 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	OR1N2	Q8NGR9	330 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	OR2G3	Q8NGZ4	309 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	H1FX	Q92522	213 aa	Known RBP	2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	CMBL	Q96DG6	245 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	PKNOX2	Q96KN3	472 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	NDEL1	Q9GZM8	345 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	PIGU	Q9H490	435 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	AUNIP	Q9H7T9	357 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	TMEM38B	Q9NVV0	291 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	ING4	Q9UNL4	249 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	SLC35A3	Q9Y2D2	325 aa		2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	TBL2	Q9Y4P3	447 aa	Known RBP	2.9	□□□□□ -1.95
ECHDC1-223	ENST00000534442	LOC102725191	A0A1B0GVB3	256 aa		2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	SERPINE3	A8MV23	424 aa		2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	C11orf94	C9JXX5	98 aa		2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	TEX46	H3BTG2	121 aa		2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	DYNC1I1	O14576	645 aa		2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	AIM2	O14862	343 aa		2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	CASQ2	O14958	399 aa	Predicted RBP	2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	ZNF861P	O60384	105 aa		2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	INS	P01308	110 aa		2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	IFNA21	P01568	189 aa		2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	IFNA17	P01571	189 aa		2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	IGLV1-51	P01701	117 aa		2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	MMP7	P09237	267 aa	Predicted RBP	2.89	□□□□□ -1.95
ECHDC1-223	ENST00000534442	TFPT	P0C1Z6	253 aa		2.89	□□□□□ -1.95

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