RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 FAM87AP0C7U9 286 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 CCNOP22674 350 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 GCHFRP30047 84 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 ERVFRD-1P60508 538 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 MRPS11P82912 194 aaKnown RBP3.47□□□□□ -1.85
SOX6-217ENST00000533870 SMAD4Q13485 552 aaKnown RBP3.47□□□□□ -1.85
SOX6-217ENST00000533870 CXorf66Q5JRM2 361 aaPredicted RBP3.47□□□□□ -1.85
SOX6-217ENST00000533870 SCNM1Q9BWG6 230 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 SLC25A2Q9BXI2 301 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 MSL2Q9HCI7 577 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 STRCQ7RTU9 1775 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 CCDC88AQ3V6T2 1871 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 IGKV1-9A0A0C4DH69 117 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 GZMBP10144 247 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 UBE2V1Q13404 147 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 OR1C1Q15619 314 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 TWIST1Q15672 202 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 WIPI1Q5MNZ9 446 aaPredicted RBP3.47□□□□□ -1.85
SOX6-217ENST00000533870 TMEM240Q5SV17 173 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 OR4F17Q8NGA8 305 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 ZNF596Q8TC21 504 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 KCNS1Q96KK3 526 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 NPCDR1Q9BY65 106 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 MRPL18Q9H0U6 180 aaKnown RBP3.47□□□□□ -1.85
SOX6-217ENST00000533870 CXXC4Q9H2H0 198 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 THYN1Q9P016 225 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 COL4A1P02462 1669 aa3.47□□□□□ -1.85
SOX6-217ENST00000533870 IGKV3D-15A0A087WSY6 115 aa3.46□□□□□ -1.85
SOX6-217ENST00000533870 SHISA9B4DS77 424 aa3.46□□□□□ -1.85
SOX6-217ENST00000533870 M0R2Z0 102 aa3.46□□□□□ -1.85
SOX6-217ENST00000533870 ZNF324O75467 553 aaPredicted RBP3.46□□□□□ -1.85
SOX6-217ENST00000533870 IL18BPO95998 194 aa3.46□□□□□ -1.85
SOX6-217ENST00000533870 PPP1R17O96001 155 aa3.46□□□□□ -1.85
SOX6-217ENST00000533870 BCL3P20749 454 aa3.46□□□□□ -1.85
SOX6-217ENST00000533870 GFERP55789 205 aa3.46□□□□□ -1.85
SOX6-217ENST00000533870 TMEM267Q0VDI3 215 aaPredicted RBP3.46□□□□□ -1.85
SOX6-217ENST00000533870 ASPHD2Q6ICH7 369 aa3.46□□□□□ -1.85
SOX6-217ENST00000533870 CIARTQ8N365 385 aaPredicted RBP3.46□□□□□ -1.85
SOX6-217ENST00000533870 FOXN4Q96NZ1 517 aa3.46□□□□□ -1.85
SOX6-217ENST00000533870 ZNF430Q9H8G1 570 aaPredicted RBP3.46□□□□□ -1.85
SOX6-217ENST00000533870 AP5S1Q9NUS5 200 aa3.46□□□□□ -1.85
SOX6-217ENST00000533870 TCF19Q9Y242 345 aa3.46□□□□□ -1.85
SOX6-217ENST00000533870 A0A1W2PQF6 199 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 COX7A2P2O60397 106 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 RAMP3O60896 148 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 ORM1P02763 201 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 JMJD7P0C870 316 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 SRFP11831 508 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 HTR1DP28221 377 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 MFAP2P55001 183 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 IBA57Q5T440 356 aaKnown RBP3.46□□□□□ -1.86
SOX6-217ENST00000533870 COLCA1Q6ZS62 124 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 ARPC1AQ92747 370 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 GPR82Q96P67 336 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 RARRES2Q99969 163 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 AMMECR1Q9Y4X0 333 aaPredicted RBP3.46□□□□□ -1.86
SOX6-217ENST00000533870 PXMP4Q9Y6I8 212 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 MYH3P11055 1940 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 TRGV8A0A0C4DH27 118 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 IZUMO1RA6ND01 250 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 SPRY1O43609 319 aaPredicted RBP3.46□□□□□ -1.86
SOX6-217ENST00000533870 TCF21O43680 179 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 ZG16O60844 167 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 P01737 135 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 SCGB1A1P11684 91 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 FABP6P51161 128 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 ARG2P78540 354 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 PLAURQ03405 335 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 ZNF146Q15072 292 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 SLC25A48Q6ZT89 311 aaKnown RBP3.46□□□□□ -1.86
SOX6-217ENST00000533870 SIGLEC12Q96PQ1 595 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 WNK3Q9BYP7 1800 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 A0A1W2PRS3 328 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 FOXI3A8MTJ6 420 aaPredicted RBP3.46□□□□□ -1.86
SOX6-217ENST00000533870 FAM157AC9JC47 383 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 SLC25A17O43808 307 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 YPEL1O60688 119 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 GPX1P07203 203 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 IER3P46695 156 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 HBBP68871 147 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 DEFB133Q30KQ1 61 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 C9orf50Q5SZB4 431 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 DCAF12Q5T6F0 453 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 PRSS41Q7RTY9 318 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 CCL4L1Q8NHW4 92 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 SSC4DQ8WTU2 575 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 YPEL2Q96QA6 119 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 NRN1Q9NPD7 142 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 PAPPA2Q9BXP8 1791 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 BMPR1BO00238 502 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 NDUFB4O95168 129 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 SP1P08047 785 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 BMI1P35226 326 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 EDDM3BP56851 147 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 HSD52Q0P140 79 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 C1orf162Q8NEQ5 155 aaPredicted RBP3.46□□□□□ -1.86
SOX6-217ENST00000533870 OR4A5Q8NH83 315 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 ABHD3Q8WU67 409 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 WNT16Q9UBV4 365 aa3.46□□□□□ -1.86
SOX6-217ENST00000533870 METAP1P53582 386 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms