RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 SCPEP1Q9HB40 452 aa8.93□□□□□ -0.98
CLCF1-202ENST00000533438 IGHV3-72A0A0B4J1Y9 119 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 C12orf77C9JDV5 145 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 GABARAPH6UMI1 98 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 SLC31A2O15432 143 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 DUS4LO95620 317 aaKnown RBP8.92□□□□□ -0.98
CLCF1-202ENST00000533438 PTHLHP12272 177 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 PRSS3P35030 304 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 REG1BP48304 166 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 ZNF137PP52743 207 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 RPL23AP62750 156 aaKnown RBP8.92□□□□□ -0.98
CLCF1-202ENST00000533438 PYDC2Q56P42 97 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 KHDC1LQ5JSQ8 128 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 SLC25A48Q6ZT89 311 aaKnown RBP8.92□□□□□ -0.98
CLCF1-202ENST00000533438 SLC35E3Q7Z769 313 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 MOB3BQ86TA1 216 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 TGIF2LXQ8IUE1 241 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 NEK7Q8TDX7 302 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 GPX8Q8TED1 209 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 SMIM4Q8WVI0 70 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 CYYR1Q96J86 154 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 EAF1Q96JC9 268 aaPredicted RBP8.92□□□□□ -0.98
CLCF1-202ENST00000533438 CCDC32Q9BV29 185 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 RIMS4Q9H426 269 aaPredicted RBP8.92□□□□□ -0.98
CLCF1-202ENST00000533438 ETAA1Q9NY74 926 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 AK3Q9UIJ7 227 aa8.92□□□□□ -0.98
CLCF1-202ENST00000533438 ELF5Q9UKW6 265 aaPredicted RBP8.92□□□□□ -0.98
CLCF1-202ENST00000533438 TRBV6-6A0A0A6YYG2 114 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 UBE2QL1A1L167 161 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 LINC01548A6NM66 108 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 SSX5O60225 188 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 NAPSAO96009 420 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 CD3GP09693 182 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 DTYMKP23919 212 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 IL3RAP26951 378 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 CD1BP29016 333 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 CBX5P45973 191 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 THBS3P49746 956 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 ZNF134P52741 427 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 GNG2P59768 71 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 SSBP1Q04837 148 aaKnown RBP8.91□□□□□ -0.98
CLCF1-202ENST00000533438 ARFRP1Q13795 201 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 TMEM30BQ3MIR4 351 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 C6orf183Q5T699 404 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 Q8N402 240 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 STPG2Q8N412 459 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 Q8N9W7 124 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 OR2T10Q8NGZ9 312 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 OR4K15Q8NH41 348 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 NUDCD2Q8WVJ2 157 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 FCAMRQ8WWV6 532 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 CMSS1Q9BQ75 279 aaKnown RBP8.91□□□□□ -0.98
CLCF1-202ENST00000533438 C12orf4Q9NQ89 552 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 PLSCR3Q9NRY6 295 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 MBNL3Q9NUK0 354 aaKnown RBP8.91□□□□□ -0.98
CLCF1-202ENST00000533438 LIN7CQ9NUP9 197 aaKnown RBP8.91□□□□□ -0.98
CLCF1-202ENST00000533438 LINC00527Q9UJ94 153 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 TRAPPC2LQ9UL33 140 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 ANAPC10Q9UM13 185 aa8.91□□□□□ -0.98
CLCF1-202ENST00000533438 J3QRK9 145 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 K7EIL1 84 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 SPINT2O43291 252 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 TXNL1O43396 289 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 HBZP02008 142 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 RCC1P18754 421 aaPredicted RBP8.9□□□□□ -0.98
CLCF1-202ENST00000533438 SLC6A1P30531 599 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 KRTAP10-11P60412 298 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 MRPS15P82914 257 aaKnown RBP8.9□□□□□ -0.98
CLCF1-202ENST00000533438 DGCR2P98153 550 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 EGFEM1PQ0D2K5 195 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 SRSF7Q16629 238 aaKnown RBP eCLIP8.9□□□□□ -0.98
CLCF1-202ENST00000533438 CT45A1Q5HYN5 189 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 TRAT1Q6PIZ9 186 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 C18orf65Q6ZTR6 163 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 FOXRED2Q8IWF2 684 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 MRPL41Q8IXM3 137 aaKnown RBP8.9□□□□□ -0.98
CLCF1-202ENST00000533438 COMMD1Q8N668 190 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 OR52I2Q8NH67 350 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 OR1L1Q8NH94 360 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 CT45A3Q8NHU0 189 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 TRIM63Q969Q1 353 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 RAB9BQ9NP90 201 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 ZFP57Q9NU63 452 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 MTFP1Q9UDX5 166 aa8.9□□□□□ -0.98
CLCF1-202ENST00000533438 RBMX2Q9Y388 322 aaKnown RBP8.9□□□□□ -0.98
CLCF1-202ENST00000533438 NCBP2LA6PVI3 153 aaKnown RBP8.89□□□□□ -0.99
CLCF1-202ENST00000533438 ZNF736B4DX44 427 aaPredicted RBP8.89□□□□□ -0.99
CLCF1-202ENST00000533438 AP4M1O00189 453 aa8.89□□□□□ -0.99
CLCF1-202ENST00000533438 RBBP9O75884 186 aa8.89□□□□□ -0.99
CLCF1-202ENST00000533438 MOSP00540 346 aa8.89□□□□□ -0.99
CLCF1-202ENST00000533438 FCGR3AP08637 254 aa8.89□□□□□ -0.99
CLCF1-202ENST00000533438 NAT1P18440 290 aa8.89□□□□□ -0.99
CLCF1-202ENST00000533438 GPR12P47775 334 aa8.89□□□□□ -0.99
CLCF1-202ENST00000533438 ACTBP60709 375 aa8.89□□□□□ -0.99
CLCF1-202ENST00000533438 SLC35B1P78383 322 aa8.89□□□□□ -0.99
CLCF1-202ENST00000533438 BAK1Q16611 211 aa8.89□□□□□ -0.99
CLCF1-202ENST00000533438 VAX1Q5SQQ9 334 aa8.89□□□□□ -0.99
CLCF1-202ENST00000533438 STEAP3Q658P3 488 aa8.89□□□□□ -0.99
CLCF1-202ENST00000533438 ZNF880Q6PDB4 577 aa8.89□□□□□ -0.99
CLCF1-202ENST00000533438 Q6ZS49 121 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms