RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 CACNA1DQ01668 2161 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 A0A1W2PPE3 182 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 A0A1W2PPH5 198 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 PPIHO43447 177 aaKnown RBP12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 CD55P08174 381 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 LTC4SQ16873 150 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 IGFL3Q6UXB1 125 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 DPPA3Q6W0C5 159 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 CYB561D1Q8N8Q1 229 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 SCGB1C1Q8TD33 95 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 TCTEX1D2Q8WW35 142 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 LURAP1Q96LR2 239 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 BSNQ9UPA5 3926 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 AKAP13Q12802 2813 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 FAM90A26D6RGX4 464 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 PROP1O75360 226 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 CLDN1O95832 211 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 RHEBQ15382 184 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 ZNF506Q5JVG8 444 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 OR8G2PQ6IF36 304 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 TMEM14EPQ6UXP3 125 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 RBMS3Q6XE24 437 aaKnown RBP12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 LILRB2Q8N423 598 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 FAM169BQ8N8A8 192 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 SNIP1Q8TAD8 396 aaKnown RBP12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 PSG11Q9UQ72 335 aa12.79□□□□□ -0.36
CACNA1E-208ENST00000533229 IGHV3OR15-7A0A075B7D8 119 aa12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 LRRC30A6NM36 301 aa12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 SRRM5B3KS81 715 aa12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 M0R1B8 84 aa12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 IFNA4P05014 189 aa12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 PTAFRP25105 342 aa12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 HBG1P69891 147 aa12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 HBG2P69892 147 aa12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 C22orf34Q6ZV56 151 aa12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 FAM24BQ8N5W8 94 aa12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 GCSAMQ8N6F7 178 aa12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 WDR61Q9GZS3 305 aaKnown RBP12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 CLN8Q9UBY8 286 aa12.78□□□□□ -0.36
CACNA1E-208ENST00000533229 TRAV1-1A0A0B4J248 108 aa12.77□□□□□ -0.36
CACNA1E-208ENST00000533229 H3BQ15 152 aa12.77□□□□□ -0.36
CACNA1E-208ENST00000533229 MT-ND4LP03901 98 aa12.77□□□□□ -0.36
CACNA1E-208ENST00000533229 TCF15Q12870 199 aa12.77□□□□□ -0.36
CACNA1E-208ENST00000533229 CATR1Q13166 79 aa12.77□□□□□ -0.36
CACNA1E-208ENST00000533229 HNF4GQ14541 408 aa12.77□□□□□ -0.36
CACNA1E-208ENST00000533229 Q3ZCU0 254 aa12.77□□□□□ -0.36
CACNA1E-208ENST00000533229 Q6ZS92 163 aa12.77□□□□□ -0.36
CACNA1E-208ENST00000533229 ZDHHC16Q969W1 377 aa12.77□□□□□ -0.36
CACNA1E-208ENST00000533229 RBMXL1Q96E39 390 aaKnown RBP12.77□□□□□ -0.36
CACNA1E-208ENST00000533229 WASF3Q9UPY6 502 aa12.77□□□□□ -0.36
CACNA1E-208ENST00000533229 hCG_1809904A0A1W2PP81 198 aa12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 A0A1W2PR64 198 aa12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 A0A1W2PRV1 198 aa12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 ZG16O60844 167 aa12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 HSPB1P04792 205 aaKnown RBP12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 FGF8P55075 233 aaPredicted RBP12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 RAB5BP61020 215 aa12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 SLC38A11Q08AI6 406 aa12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 VHLLQ6RSH7 139 aa12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 LCN15Q6UWW0 184 aa12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 ZNRF1Q8ND25 227 aa12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 OR2V2Q96R30 315 aa12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 PSMG3Q9BT73 122 aaPredicted RBP12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 ZFHX2Q9C0A1 2572 aaPredicted RBP12.77□□□□□ -0.37
CACNA1E-208ENST00000533229 UBE2L5PA0A1B0GUS4 154 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 HBE1P02100 147 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 RPS23P62266 143 aaKnown RBP12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 PAX5Q02548 391 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 TIMM23BQ5SRD1 257 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 SLC16A13Q7RTY0 426 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 C1orf174Q8IYL3 243 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 ZNF665Q9H7R5 613 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 GNG13Q9P2W3 67 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 USF3Q68DE3 2245 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 PTPRBP23467 1997 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 CUL9Q8IWT3 2517 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 C5orf52A6NGY3 159 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 PMS2P5A8MQ11 134 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 SPINT2O43291 252 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 CLDN14O95500 239 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 IGHV3-13P01766 116 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 IGHV3-7P01780 117 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 OR8U8P0C7N1 319 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 RPS16P62249 146 aaKnown RBP12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 HTD2P86397 168 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 MSMO1Q15800 293 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 RNF212Q495C1 297 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 SPINK9Q5DT21 86 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 FAM201AQ5SY85 155 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 UTF1Q5T230 341 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 NCR3LG1Q68D85 454 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 RBMXL3Q8N7X1 1067 aaKnown RBP12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 NANPQ8TBE9 248 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 TAF15Q92804 592 aaKnown RBP eCLIP12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 RAB39BQ96DA2 213 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 RCC1LQ96I51 464 aaKnown RBP12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 CADP27708 2225 aa12.76□□□□□ -0.37
CACNA1E-208ENST00000533229 LOC102723971A0A1B0GUV8 181 aa12.75□□□□□ -0.37
CACNA1E-208ENST00000533229 ZNF727A8MUV8 499 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms