RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 H3BUX3 64 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 TXNL1O43396 289 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 LANCL1O43813 399 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 VENTXO95231 258 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 FAUP35544 74 aaKnown RBP9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 GPR12P47775 334 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 REG1BP48304 166 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 RFX2P48378 723 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 RAB13P51153 203 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 LUMP51884 338 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 RIPPLY3P57055 190 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 DYRK1AQ13627 763 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 DIAPH2-AS1Q14236 149 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 DHRS11Q6UWP2 260 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 ZNF833PQ6ZTB9 187 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 OVCH2Q7RTZ1 564 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 NRARPQ7Z6K4 114 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 MOB3BQ86TA1 216 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 PRIMA1Q86XR5 153 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 ODF3L1Q8IXM7 274 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 DUSP18Q8NEJ0 188 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 OR6F1Q8NGZ6 308 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 SMIM4Q8WVI0 70 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 CAPSLQ8WWF8 208 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 GIMAP1Q8WWP7 306 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 RTN4IP1Q8WWV3 396 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 DUX5Q96PT3 197 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 NEURL2Q9BR09 285 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 ESM1Q9NQ30 184 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 TAS2R8Q9NYW2 309 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 EHFQ9NZC4 300 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 ZNF107Q9UII5 783 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 GAB2Q9UQC2 676 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 SAA2-SAA4A0A096LPE2 208 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 IGHV1-3A0A0C4DH29 117 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 TIMM23O14925 209 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 DHFRP00374 187 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 IFNA6P05013 189 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 FAM106CPP0CH98 169 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 SAA2P0DJI9 122 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 TBPP20226 339 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 HRH1P35367 487 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 TAS2R19P59542 299 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 TSPAN5P62079 268 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 UBA52P62987 128 aaKnown RBP9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 ACTBL2Q562R1 376 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 FAM71F2Q6NXP2 309 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 THNSL2Q86YJ6 484 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 DRAM1Q8N682 238 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 TMEM229BQ8NBD8 167 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 PIFOQ8TCI5 191 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 PITPNC1Q9UKF7 332 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 VPREB3Q9UKI3 123 aa9.05□□□□□ -0.96
TRAPPC4-211ENST00000533012 NF1P21359 2839 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 ZFHX3Q15911 3703 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 A0A1W2PPI3 338 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 TUSC2O75896 110 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 SLC22A5O76082 557 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 RNASE1P07998 156 aaKnown RBP9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 CSF1P09603 554 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 AADACP22760 399 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 CD24P25063 80 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 RAG2P55895 527 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 HERV-K104P61576 105 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 LY6EQ16553 131 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 RPL39P5Q59GN2 51 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 RNASE10Q5GAN6 216 aaKnown RBP9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 VAX1Q5SQQ9 334 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 TMEM17Q86X19 198 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 OR56B4Q8NH76 319 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 ZNF251Q9BRH9 671 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 CHIAQ9BZP6 476 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 OR2D2Q9H210 308 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 TCF19Q9Y242 345 aa9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 RBMX2Q9Y388 322 aaKnown RBP9.04□□□□□ -0.96
TRAPPC4-211ENST00000533012 CUBNO60494 3623 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 HMX3A6NHT5 357 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 FAM90A9PA6NNJ1 464 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 M0QYG6 137 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 CCNKO75909 580 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 RAB3DO95716 219 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 PPYP01298 95 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 CD3DP04234 171 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 CRYBA1P05813 215 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 CD1BP29016 333 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 EIF2B2P49770 351 aaKnown RBP9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 HES1Q14469 280 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 HABP2Q14520 560 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 STEAP1BQ6NZ63 245 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 LIAT1Q6ZQX7 453 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 ZNF645Q8N7E2 425 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 CFHR4Q92496 578 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 TRIM63Q969Q1 353 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 NABP2Q9BQ15 211 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 ZNF2Q9BSG1 426 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 RAB18Q9NP72 206 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 SDHAF2Q9NX18 166 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 NUBP2Q9Y5Y2 271 aa9.03□□□□□ -0.96
TRAPPC4-211ENST00000533012 SETD2Q9BYW2 2564 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms