RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ADAMTSL1Q8N6G6 1762 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 MPDZO75970 2070 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 A0A1W2PP64 1363 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 NID2Q14112 1375 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 MAP3K5Q99683 1374 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 TEX50A0A1B0GTY4 177 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 C21orf140B9A014 251 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 MRASO14807 208 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 SLC25A20O43772 301 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 SSNA1O43805 119 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 REG1AP05451 166 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 ZNF22P17026 224 aaPredicted RBP1.49□□□□□ -2.17
CD44-234ENST00000531873 PPP1CCP36873 323 aaKnown RBP1.49□□□□□ -2.17
CD44-234ENST00000531873 CXCR4P61073 352 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 FGF12P61328 243 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 HERVK_113P63121 156 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 PYCR3Q53H96 274 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 COQ5Q5HYK3 327 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 ATP5L2Q7Z4Y8 100 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 ZNF567Q8N184 647 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 ZNF664Q8N3J9 261 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 OR8J2Q8NGG1 315 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 ERMNQ8TAM6 284 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 RNF133Q8WVZ7 376 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 RAD51AP1Q96B01 352 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 PKMYT1Q99640 499 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 TM2D3Q9BRN9 247 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 ABCG5Q9H222 651 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 HDGFL3Q9Y3E1 203 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 POLR3HQ9Y535 204 aaPredicted RBP1.49□□□□□ -2.17
CD44-234ENST00000531873 ABCC8Q09428 1581 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 CEP170Q5SW79 1584 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 KMT2BQ9UMN6 2715 aaPredicted RBP1.49□□□□□ -2.17
CD44-234ENST00000531873 SETXQ7Z333 2677 aaKnown RBP1.49□□□□□ -2.17
CD44-234ENST00000531873 BDP1A6H8Y1 2624 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 MAST4O15021 2626 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 FLNBO75369 2602 aaKnown RBP1.49□□□□□ -2.17
CD44-234ENST00000531873 BCORL1Q5H9F3 1711 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 SOGA1O94964 1423 aa1.49□□□□□ -2.17
CD44-234ENST00000531873 PREX1Q8TCU6 1659 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 ABCC11Q96J66 1382 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 LRP6O75581 1613 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 IGSF23A1L1A6 192 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 LRRN3E7EW58 273 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 COPEO14579 308 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 TGOLN2O43493 480 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 DEDDO75618 318 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 STK16O75716 305 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 IL6P05231 212 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 CRYBA1P05813 215 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 KRT7P08729 469 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 IGHV3-30-3P0DP02 117 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 RPS12P25398 132 aaKnown RBP1.48□□□□□ -2.17
CD44-234ENST00000531873 RPL12P30050 165 aaKnown RBP1.48□□□□□ -2.17
CD44-234ENST00000531873 OPRM1P35372 400 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 RPS24P62847 133 aaKnown RBP1.48□□□□□ -2.17
CD44-234ENST00000531873 FABP5Q01469 135 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 ITGB3BPQ13352 177 aaPredicted RBP1.48□□□□□ -2.17
CD44-234ENST00000531873 JOSD1Q15040 202 aaPredicted RBP1.48□□□□□ -2.17
CD44-234ENST00000531873 PDK2Q15119 407 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 SPIN4Q56A73 249 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 ACSBG2Q5FVE4 666 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 NOXRED1Q6NXP6 359 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 LRRN1Q6UXK5 716 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 NAA40Q86UY6 237 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 LY6G5BQ8NDX9 201 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 PIGXQ8TBF5 258 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 EEF1AKMT1Q8WVE0 214 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 RAB8BQ92930 207 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 PTH2Q96A98 100 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 MED18Q9BUE0 208 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 EIF5A2Q9GZV4 153 aaKnown RBP1.48□□□□□ -2.17
CD44-234ENST00000531873 C16orf95Q9H693 158 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 FGFR1OP2Q9NVK5 253 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 BABAM2Q9NXR7 383 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 ZNF391Q9UJN7 358 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 CARHSP1Q9Y2V2 147 aaKnown RBP1.48□□□□□ -2.17
CD44-234ENST00000531873 COL18A1P39060 1754 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 DICER1Q9UPY3 1922 aaKnown RBP1.48□□□□□ -2.17
CD44-234ENST00000531873 PLCH2O75038 1416 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 SPATA31E1Q6ZUB1 1445 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 KIAA2026Q5HYC2 2103 aa1.48□□□□□ -2.17
CD44-234ENST00000531873 NYNRINQ9P2P1 1898 aaKnown RBP1.48□□□□□ -2.17
CD44-234ENST00000531873 VWDEQ8N2E2 1590 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 SCN9AQ15858 1988 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 MAGI3Q5TCQ9 1506 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 ABCC2Q92887 1545 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 DLC1Q96QB1 1528 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 TRAV8-1A0A0A6YYK1 113 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 IGKV2-24A0A0C4DH68 120 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 LOC102725191A0A1B0GVB3 256 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 A0A1W2PNM2 257 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 EVPLLA8MZ36 301 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 AHSA1O95433 338 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 APOEP02649 317 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 IL3P08700 152 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 OR4A8P0C604 315 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 P0C880 135 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 CRABP1P29762 137 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 OR10J1P30954 320 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms