RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 GLO1Q04760 184 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 TSPAN31Q12999 210 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 JOSD1Q15040 202 aaPredicted RBP2.49□□□□□ -2.01
USP47-211ENST00000531513 C10orf91Q5T1B1 145 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 SFXN4Q6P4A7 337 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 TMEM136Q6ZRR5 245 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 LYZL2Q7Z4W2 148 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 UBL4BQ8N7F7 174 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 ZNF721Q8TF20 911 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 RMI2Q96E14 147 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 SLC35G5Q96KT7 338 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 SELENOSQ9BQE4 189 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 CENPHQ9H3R5 247 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 SLC2A9Q9NRM0 540 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 OR5V1Q9UGF6 321 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 SLC23A2Q9UGH3 650 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 SAMHD1Q9Y3Z3 626 aaKnown RBP2.49□□□□□ -2.01
USP47-211ENST00000531513 LSM5Q9Y4Y9 91 aaKnown RBP2.49□□□□□ -2.01
USP47-211ENST00000531513 THSD7AQ9UPZ6 1657 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 SSH2Q76I76 1423 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 ARID1AO14497 2285 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 M0R381 172 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 LECT2O14960 151 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 EEF1E1O43324 174 aaKnown RBP2.48□□□□□ -2.01
USP47-211ENST00000531513 ZNF189O75820 626 aaPredicted RBP2.48□□□□□ -2.01
USP47-211ENST00000531513 IGHV3-53P01767 116 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 PRPS1L1P21108 318 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 SULT1A1P50225 295 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 DAPP51397 102 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 IDH3GP51553 393 aaPredicted RBP2.48□□□□□ -2.01
USP47-211ENST00000531513 CTBP2P56545 445 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 KLF3P57682 345 aaPredicted RBP2.48□□□□□ -2.01
USP47-211ENST00000531513 FGF12P61328 243 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 ERVS71-1P61550 626 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 RANP62826 216 aaKnown RBP2.48□□□□□ -2.01
USP47-211ENST00000531513 SPA17Q15506 151 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 BATFQ16520 125 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 FAM78BQ5VT40 261 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 LRP11Q86VZ4 500 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 OR5B17Q8NGF7 314 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 CD200R1Q8TD46 325 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 DEDD2Q8WXF8 326 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 HIST1H2BAQ96A08 127 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 IMP4Q96G21 291 aaKnown RBP2.48□□□□□ -2.01
USP47-211ENST00000531513 OR52B2Q96RD2 323 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 ZNF2Q9BSG1 426 aaPredicted RBP2.48□□□□□ -2.01
USP47-211ENST00000531513 TMEM109Q9BVC6 243 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 RSPO3Q9BXY4 272 aaPredicted RBP2.48□□□□□ -2.01
USP47-211ENST00000531513 U3KQK5 164 aa2.48□□□□□ -2.01
USP47-211ENST00000531513 IGKV1D-37A0A075B6S9 117 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 E5RI56 91 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 KPNA3O00505 521 aaPredicted RBP2.47□□□□□ -2.01
USP47-211ENST00000531513 KRT75O95678 551 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 MT-CO2P00403 227 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 OPN1SWP03999 348 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 OR10J1P30954 320 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 PPP1R2P41236 205 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 SRSF6Q13247 344 aaKnown RBP2.47□□□□□ -2.01
USP47-211ENST00000531513 OR8G1Q15617 311 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 SNCBQ16143 134 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 PPP1R2P3Q6NXS1 205 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 ZNF550Q7Z398 422 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 ZNF680Q8NEM1 530 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 OR5P3Q8WZ94 311 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 MS4A6EQ96DS6 147 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 PRAP1Q96NZ9 151 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 TBX5Q99593 518 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 STOML2Q9UJZ1 356 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 ZNF443Q9Y2A4 671 aaPredicted RBP2.47□□□□□ -2.01
USP47-211ENST00000531513 WASHC3Q9Y3C0 194 aa2.47□□□□□ -2.01
USP47-211ENST00000531513 ZFYVE9O95405 1425 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 ADGRL3Q9HAR2 1447 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 TGIF2-C20orf24A0A0A6YYL0 155 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 DISC1C4P0D8 188 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 GSTZ1O43708 216 aaPredicted RBP2.46□□□□□ -2.02
USP47-211ENST00000531513 SLC25A20O43772 301 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 CD7P09564 240 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 INAFM2P0DMQ5 153 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 ALOX5APP20292 161 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 PPP1CCP36873 323 aaKnown RBP2.46□□□□□ -2.02
USP47-211ENST00000531513 CA7P43166 264 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 MARCKSL1P49006 195 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 AKR1C2P52895 323 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 TMEM33P57088 247 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 SPCS3P61009 180 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 LY6EQ16553 131 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 PYCR3Q53H96 274 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 ZNF660Q6AZW8 331 aaPredicted RBP2.46□□□□□ -2.02
USP47-211ENST00000531513 FAM173BQ6P4H8 233 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 BAP18Q8IXM2 172 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 C1orf174Q8IYL3 243 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 C1orf158Q8N1D5 194 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 TMEM86BQ8N661 226 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 ZFAND2AQ8N6M9 145 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 PHOSPHO2Q8TCD6 241 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 DIRAS2Q96HU8 199 aa2.46□□□□□ -2.02
USP47-211ENST00000531513 MARCOQ9UEW3 520 aaPredicted RBP2.46□□□□□ -2.02
USP47-211ENST00000531513 CARHSP1Q9Y2V2 147 aaKnown RBP2.46□□□□□ -2.02
USP47-211ENST00000531513 KMT2EQ8IZD2 1858 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms