RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 SOX15O60248 233 aa13.18□□□□□ -0.3
PKP3-207ENST00000530695 RBBP9O75884 186 aa13.18□□□□□ -0.3
PKP3-207ENST00000530695 LY86O95711 162 aa13.18□□□□□ -0.3
PKP3-207ENST00000530695 CRIP2P52943 208 aaPredicted RBP13.18□□□□□ -0.3
PKP3-207ENST00000530695 RPS25P62851 125 aaKnown RBP13.18□□□□□ -0.3
PKP3-207ENST00000530695 RAB11BQ15907 218 aa13.18□□□□□ -0.3
PKP3-207ENST00000530695 C19orf54Q5BKX5 351 aa13.18□□□□□ -0.3
PKP3-207ENST00000530695 TCTEX1D1Q8N7M0 179 aa13.18□□□□□ -0.3
PKP3-207ENST00000530695 OR5AN1Q8NGI8 311 aa13.18□□□□□ -0.3
PKP3-207ENST00000530695 CASTOR1Q8WTX7 329 aa13.18□□□□□ -0.3
PKP3-207ENST00000530695 DCUN1D4Q92564 292 aa13.18□□□□□ -0.3
PKP3-207ENST00000530695 C11orf54Q9H0W9 315 aaPredicted RBP13.18□□□□□ -0.3
PKP3-207ENST00000530695 ALX4Q9H161 411 aaPredicted RBP13.18□□□□□ -0.3
PKP3-207ENST00000530695 HSF4Q9ULV5 492 aa13.18□□□□□ -0.3
PKP3-207ENST00000530695 TPRKBQ9Y3C4 175 aa13.18□□□□□ -0.3
PKP3-207ENST00000530695 AK6Q9Y3D8 172 aaKnown RBP13.18□□□□□ -0.3
PKP3-207ENST00000530695 OVOL1O14753 267 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 DENRO43583 198 aaKnown RBP13.17□□□□□ -0.3
PKP3-207ENST00000530695 ARL6IP5O75915 188 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 SCTP09683 121 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 VEGFCP49767 419 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 TMEM267Q0VDI3 215 aaPredicted RBP13.17□□□□□ -0.3
PKP3-207ENST00000530695 TPBGQ13641 420 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 TRAM1Q15629 374 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 ZNF429Q86V71 674 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 DRAXINQ8NBI3 349 aaPredicted RBP13.17□□□□□ -0.3
PKP3-207ENST00000530695 ARHGAP5-AS1Q96IT6 56 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 RNF5Q99942 180 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 Q9N2K0 584 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 C12orf4Q9NQ89 552 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 RNF150Q9ULK6 438 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 NUBP2Q9Y5Y2 271 aa13.17□□□□□ -0.3
PKP3-207ENST00000530695 FOXI3A8MTJ6 420 aaPredicted RBP13.16□□□□□ -0.3
PKP3-207ENST00000530695 RGS10O43665 173 aa13.16□□□□□ -0.3
PKP3-207ENST00000530695 EGR2P11161 476 aaPredicted RBP13.16□□□□□ -0.3
PKP3-207ENST00000530695 SLURP1P55000 103 aa13.16□□□□□ -0.3
PKP3-207ENST00000530695 TMEM50BP56557 158 aa13.16□□□□□ -0.3
PKP3-207ENST00000530695 CLDN12P56749 244 aa13.16□□□□□ -0.3
PKP3-207ENST00000530695 PPP1R27Q86WC6 154 aa13.16□□□□□ -0.3
PKP3-207ENST00000530695 DLX4Q92988 240 aaPredicted RBP13.16□□□□□ -0.3
PKP3-207ENST00000530695 PTX4Q96A99 478 aa13.16□□□□□ -0.3
PKP3-207ENST00000530695 CLCC1Q96S66 551 aa13.16□□□□□ -0.3
PKP3-207ENST00000530695 ASCL2Q99929 193 aa13.16□□□□□ -0.3
PKP3-207ENST00000530695 TOLLIPQ9H0E2 274 aa13.16□□□□□ -0.3
PKP3-207ENST00000530695 DUSP21Q9H596 190 aa13.16□□□□□ -0.3
PKP3-207ENST00000530695 ISYNA1Q9NPH2 558 aa13.16□□□□□ -0.3
PKP3-207ENST00000530695 METTL1Q9UBP6 276 aaKnown RBP13.16□□□□□ -0.3
PKP3-207ENST00000530695 GAB2Q9UQC2 676 aa13.16□□□□□ -0.3
PKP3-207ENST00000530695 LINC01619G3V211 115 aa13.15□□□□□ -0.3
PKP3-207ENST00000530695 SAP30O75446 220 aa13.15□□□□□ -0.3
PKP3-207ENST00000530695 LGALS1P09382 135 aaKnown RBP13.15□□□□□ -0.3
PKP3-207ENST00000530695 CPEP16870 476 aa13.15□□□□□ -0.3
PKP3-207ENST00000530695 PSMA1P25786 263 aaKnown RBP13.15□□□□□ -0.3
PKP3-207ENST00000530695 CALRP27797 417 aaKnown RBP13.15□□□□□ -0.3
PKP3-207ENST00000530695 MLLT11Q13015 90 aaPredicted RBP13.15□□□□□ -0.3
PKP3-207ENST00000530695 PSG5Q15238 335 aa13.15□□□□□ -0.3
PKP3-207ENST00000530695 ACTBL2Q562R1 376 aa13.15□□□□□ -0.3
PKP3-207ENST00000530695 PYHIN1Q6K0P9 492 aa13.15□□□□□ -0.3
PKP3-207ENST00000530695 CD200R1LQ6Q8B3 271 aa13.15□□□□□ -0.3
PKP3-207ENST00000530695 UNQ5815/PRO19632Q6UWF5 114 aa13.15□□□□□ -0.3
PKP3-207ENST00000530695 CMSS1Q9BQ75 279 aaKnown RBP13.15□□□□□ -0.3
PKP3-207ENST00000530695 FAM103A1Q9BTL3 118 aaKnown RBP13.15□□□□□ -0.3
PKP3-207ENST00000530695 PECRQ9BY49 303 aa13.15□□□□□ -0.3
PKP3-207ENST00000530695 CCDC90BQ9GZT6 254 aa13.15□□□□□ -0.3
PKP3-207ENST00000530695 ZNF221Q9UK13 617 aa13.15□□□□□ -0.3
PKP3-207ENST00000530695 IGHV4OR15-8A0A075B7B6 117 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 A0A087WW49 117 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 PROP1O75360 226 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 IGKV1-16P04430 117 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 FABP5Q01469 135 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 C2orf76Q3KRA6 126 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 AKIRIN2Q53H80 203 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 ZNF562Q6V9R5 426 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 ZNF383Q8NA42 475 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 LFNGQ8NES3 379 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 OR56B1Q8NGI3 324 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 FAM3DQ96BQ1 224 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 CNBD2Q96M20 576 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 MS4A10Q96PG2 267 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 TSNAXQ99598 290 aaKnown RBP13.14□□□□□ -0.31
PKP3-207ENST00000530695 TPSG1Q9NRR2 321 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 SMAD5-AS1Q9Y6J3 95 aa13.14□□□□□ -0.31
PKP3-207ENST00000530695 TNCP24821 2201 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 IGKV1-6A0A0C4DH72 117 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 TRDCB7Z8K6 153 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 SPDEFO95238 335 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 CA2P00918 260 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 IGHV3-11P01762 117 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 TFAP2AP05549 437 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 SNRPBP14678 240 aaKnown RBP13.13□□□□□ -0.31
PKP3-207ENST00000530695 CD40LGP29965 261 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 RANBP1P43487 201 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 LINC00205P59089 165 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 TPPP2P59282 170 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 RPS16P62249 146 aaKnown RBP13.13□□□□□ -0.31
PKP3-207ENST00000530695 PLAC9Q5JTB6 97 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 MGLLQ99685 303 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 RDH8Q9NYR8 311 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 V9GY05 133 aa13.13□□□□□ -0.31
PKP3-207ENST00000530695 RYR3Q15413 4870 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms