RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CENPVL3A0A0U1RRI6 287 aa8.65□□□□□ -1.02
SOX6-213ENST00000530378 A8MV72 311 aaPredicted RBP8.65□□□□□ -1.02
SOX6-213ENST00000530378 INMT-MINDY4F8WBC2 141 aa8.65□□□□□ -1.02
SOX6-213ENST00000530378 GPR31O00270 319 aa8.65□□□□□ -1.02
SOX6-213ENST00000530378 VAMP1P23763 118 aa8.65□□□□□ -1.02
SOX6-213ENST00000530378 RAB7AP51149 207 aa8.65□□□□□ -1.02
SOX6-213ENST00000530378 UBE2MP61081 183 aaKnown RBP8.65□□□□□ -1.02
SOX6-213ENST00000530378 C1orf122Q6ZSJ8 110 aa8.65□□□□□ -1.02
SOX6-213ENST00000530378 Q71RC1 249 aaPredicted RBP8.65□□□□□ -1.02
SOX6-213ENST00000530378 C22orf15Q8WYQ4 148 aa8.65□□□□□ -1.02
SOX6-213ENST00000530378 SLC25A21Q9BQT8 299 aaPredicted RBP8.65□□□□□ -1.02
SOX6-213ENST00000530378 RSRP1Q9BUV0 290 aa8.65□□□□□ -1.02
SOX6-213ENST00000530378 TOLLIPQ9H0E2 274 aa8.65□□□□□ -1.02
SOX6-213ENST00000530378 COPZ2Q9P299 210 aa8.65□□□□□ -1.02
SOX6-213ENST00000530378 A0A0B4J293 547 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 ODF3BA8MYP8 253 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 IGLV1-47P01700 117 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 CTSDP07339 412 aaPredicted RBP8.64□□□□□ -1.03
SOX6-213ENST00000530378 CD34P28906 385 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 SAA4P35542 130 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 PRRX1P54821 245 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 PPP1R1AQ13522 171 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 SLC9A3R2Q15599 337 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 C4orf46Q504U0 113 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 KLF17Q5JT82 389 aaPredicted RBP8.64□□□□□ -1.03
SOX6-213ENST00000530378 NCR3LG1Q68D85 454 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 ZNF626Q68DY1 528 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 TBC1D26Q86UD7 250 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 ZDHHC22Q8N966 263 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 DUSP18Q8NEJ0 188 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 ZFAND1Q8TCF1 268 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 MRPL20Q9BYC9 149 aaKnown RBP8.64□□□□□ -1.03
SOX6-213ENST00000530378 UNKLQ9H9P5 680 aaKnown RBP8.64□□□□□ -1.03
SOX6-213ENST00000530378 YAE1D1Q9NRH1 226 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 IGHV3-72A0A0B4J1Y9 119 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 TEX13DA0A0J9YY54 714 aaPredicted RBP8.64□□□□□ -1.03
SOX6-213ENST00000530378 A0A1B0GVG6 124 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 LINC00473A8K010 186 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 BUB1B-PAK6H3BSN5 160 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 PROP1O75360 226 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 PEX14O75381 377 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 LGALS4P56470 323 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 RPL30P62888 115 aaKnown RBP8.64□□□□□ -1.03
SOX6-213ENST00000530378 SSX2Q16385 188 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 SP6Q3SY56 376 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 GPR157Q5UAW9 335 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 CMTM1Q8IZ96 169 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 DYNAPQ8N1N2 210 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 OR11H6Q8NGC7 330 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 ZNF596Q8TC21 504 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 CASTOR1Q8WTX7 329 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 TCTEX1D2Q8WW35 142 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 RTN4IP1Q8WWV3 396 aaPredicted RBP8.64□□□□□ -1.03
SOX6-213ENST00000530378 C18orf12Q96KH6 178 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 ZNF251Q9BRH9 671 aa8.64□□□□□ -1.03
SOX6-213ENST00000530378 NAV3Q8IVL0 2385 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 IGHV1-69DA0A0B4J2H0 117 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 RAB29O14966 203 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 NPFFO15130 113 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 IGHV1-69P01742 117 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 HLA-AP01891 365 aaKnown RBP8.63□□□□□ -1.03
SOX6-213ENST00000530378 GATA3P23771 443 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 UBE2E1P51965 193 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 UCP3P55916 312 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 CBX3Q13185 183 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 SURF2Q15527 256 aaPredicted RBP8.63□□□□□ -1.03
SOX6-213ENST00000530378 LIN54Q6MZP7 749 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 KCTD9Q7L273 389 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 LINC00311Q8N616 119 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 BEND2Q8NDZ0 799 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 BVESQ8NE79 360 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 RPEQ96AT9 228 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 DMRTB1Q96MA1 342 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 SCGB3A2Q96PL1 93 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 MARVELD1Q9BSK0 173 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 PIPOXQ9P0Z9 390 aa8.63□□□□□ -1.03
SOX6-213ENST00000530378 HIVEP2P31629 2446 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 NSD1Q96L73 2696 aaPredicted RBP8.62□□□□□ -1.03
SOX6-213ENST00000530378 PGLYRP1O75594 196 aaPredicted RBP8.62□□□□□ -1.03
SOX6-213ENST00000530378 OR5AC1P0C628 307 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 OR4E1P0C645 316 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 RPA2P15927 270 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 EPHA1P21709 976 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 CD24P25063 80 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 IL3RAP26951 378 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 HTR1DP28221 377 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 ECI1P42126 302 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 SUPT4H1P63272 117 aaKnown RBP8.62□□□□□ -1.03
SOX6-213ENST00000530378 TATDN3Q17R31 274 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 ZNF833PQ6ZTB9 187 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 SLC25A42Q86VD7 318 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 TGIF2LXQ8IUE1 241 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 CCDC71LQ8N9Z2 235 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 TP53RKQ96S44 253 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 S1PR3Q99500 378 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 AMMECR1Q9Y4X0 333 aaPredicted RBP8.62□□□□□ -1.03
SOX6-213ENST00000530378 ALG5Q9Y673 324 aa8.62□□□□□ -1.03
SOX6-213ENST00000530378 A0A0U1RQK1 487 aa8.61□□□□□ -1.03
SOX6-213ENST00000530378 MDFIC2A0A1B0GVS7 189 aa8.61□□□□□ -1.03
SOX6-213ENST00000530378 J3QLI3 93 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms