RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 AGMATQ9BSE5 352 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 LIN7CQ9NUP9 197 aaKnown RBP11.82□□□□□ -0.52
TTC39A-216ENST00000530004 TMEM56-RWDD3S4R434 201 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 DSCAML1Q8TD84 2053 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 B3GALNT1O75752 331 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 CDS2O95674 445 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 ZNF16P17020 682 aaPredicted RBP11.82□□□□□ -0.52
TTC39A-216ENST00000530004 ZNF134P52741 427 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 CYCSP99999 105 aaKnown RBP11.82□□□□□ -0.52
TTC39A-216ENST00000530004 IAH1Q2TAA2 248 aaPredicted RBP11.82□□□□□ -0.52
TTC39A-216ENST00000530004 SELENOHQ8IZQ5 122 aaKnown RBP11.82□□□□□ -0.52
TTC39A-216ENST00000530004 OR52M1Q8NGK5 317 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 SDHAF2Q9NX18 166 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 RPUSD1Q9UJJ7 312 aaKnown RBP11.82□□□□□ -0.52
TTC39A-216ENST00000530004 HSPB11Q9Y547 144 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 FXYD6-FXYD2A0A087WZ82 144 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 TRBV23-1A0A0A0MS06 115 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 RNF212BA8MTL3 300 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 SLC31A2O15432 143 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 GPR12P47775 334 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 ERVFRD-1P60508 538 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 EIF4EBP1Q13541 118 aaPredicted RBP11.81□□□□□ -0.52
TTC39A-216ENST00000530004 Q3ZCU0 254 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 ESCO2Q56NI9 601 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 WDR25Q64LD2 544 aaPredicted RBP11.81□□□□□ -0.52
TTC39A-216ENST00000530004 BTNL3Q6UXE8 466 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 OR10A7Q8NGE5 316 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 ABHD14AQ9BUJ0 271 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 IFI27L2Q9H2X8 130 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 GSKIPQ9P0R6 139 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 TMED3Q9Y3Q3 217 aa11.81□□□□□ -0.52
TTC39A-216ENST00000530004 A0A1W2PPE3 182 aa11.8□□□□□ -0.52
TTC39A-216ENST00000530004 ITGB1BP1O14713 200 aa11.8□□□□□ -0.52
TTC39A-216ENST00000530004 GPR37O15354 613 aa11.8□□□□□ -0.52
TTC39A-216ENST00000530004 SERPINE2P07093 398 aa11.8□□□□□ -0.52
TTC39A-216ENST00000530004 RAB7AP51149 207 aa11.8□□□□□ -0.52
TTC39A-216ENST00000530004 GNB2P62879 340 aa11.8□□□□□ -0.52
TTC39A-216ENST00000530004 RPL30P62888 115 aaKnown RBP11.8□□□□□ -0.52
TTC39A-216ENST00000530004 CT45A1Q5HYN5 189 aa11.8□□□□□ -0.52
TTC39A-216ENST00000530004 HEPN1Q6WQI6 88 aa11.8□□□□□ -0.52
TTC39A-216ENST00000530004 MAPK1IP1LQ8NDC0 245 aa11.8□□□□□ -0.52
TTC39A-216ENST00000530004 CT45A3Q8NHU0 189 aa11.8□□□□□ -0.52
TTC39A-216ENST00000530004 RBPMSQ93062 196 aaKnown RBP11.8□□□□□ -0.52
TTC39A-216ENST00000530004 SSBP3Q9BWW4 388 aaPredicted RBP11.8□□□□□ -0.52
TTC39A-216ENST00000530004 FAM157AC9JC47 383 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 MPC2O95563 127 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 PSMB6P28072 239 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 GNG10P50151 68 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 CATR1Q13166 79 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 LGALSLQ3ZCW2 172 aaPredicted RBP11.79□□□□□ -0.52
TTC39A-216ENST00000530004 C11orf87Q6NUJ2 197 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 ZNF439Q8NDP4 499 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 IL22RA2Q969J5 263 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 DUXBA0A1W2PPF3 345 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 HMSDA8MTL9 139 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 A8MXK9 166 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 ARPC5O15511 151 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 DLX6P56179 175 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 ZNF66Q6ZN08 573 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 CIARTQ8N365 385 aaPredicted RBP11.79□□□□□ -0.52
TTC39A-216ENST00000530004 ZBTB8BQ8NAP8 495 aaPredicted RBP11.79□□□□□ -0.52
TTC39A-216ENST00000530004 TCTEX1D2Q8WW35 142 aa11.79□□□□□ -0.52
TTC39A-216ENST00000530004 KIAA1324LA8MWY0 1029 aaPredicted RBP11.78□□□□□ -0.52
TTC39A-216ENST00000530004 SLC25A4P12235 298 aa11.78□□□□□ -0.52
TTC39A-216ENST00000530004 ZFP36P26651 326 aaKnown RBP11.78□□□□□ -0.52
TTC39A-216ENST00000530004 IL15RAQ13261 267 aa11.78□□□□□ -0.52
TTC39A-216ENST00000530004 ZNF585BQ52M93 769 aa11.78□□□□□ -0.52
TTC39A-216ENST00000530004 OR2B11Q5JQS5 317 aa11.78□□□□□ -0.52
TTC39A-216ENST00000530004 FAM219AQ8IW50 185 aa11.78□□□□□ -0.52
TTC39A-216ENST00000530004 THAP6Q8TBB0 222 aa11.78□□□□□ -0.52
TTC39A-216ENST00000530004 HSD17B10Q99714 261 aaKnown RBP11.78□□□□□ -0.52
TTC39A-216ENST00000530004 VPS13CQ709C8 3753 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 MALRD1Q5VYJ5 2156 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 PIGBOS1A0A0B4J2F0 54 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 M0R1X1 148 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 PROP1O75360 226 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 FOXH1O75593 365 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 IGKV1-39P01597 117 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 IGKV1D-39P04432 117 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 CXCL2P19875 107 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 LINC00205P59089 165 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 RAB32Q13637 225 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 RPL39P5Q59GN2 51 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 ZNF546Q86UE3 836 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 LYG1Q8N1E2 194 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 C1orf159Q96HA4 380 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 MBD2Q9UBB5 411 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 GAB2Q9UQC2 676 aa11.77□□□□□ -0.52
TTC39A-216ENST00000530004 MYO9AB2RTY4 2548 aa11.77□□□□□ -0.53
TTC39A-216ENST00000530004 LINC00473A8K010 186 aa11.77□□□□□ -0.53
TTC39A-216ENST00000530004 C22orf46C9J442 243 aa11.77□□□□□ -0.53
TTC39A-216ENST00000530004 RAB29O14966 203 aa11.77□□□□□ -0.53
TTC39A-216ENST00000530004 RAMP3O60896 148 aa11.77□□□□□ -0.53
TTC39A-216ENST00000530004 VDAC1P21796 283 aa11.77□□□□□ -0.53
TTC39A-216ENST00000530004 DUTP33316 252 aaKnown RBP11.77□□□□□ -0.53
TTC39A-216ENST00000530004 S100A10P60903 97 aa11.77□□□□□ -0.53
TTC39A-216ENST00000530004 LCN2P80188 198 aa11.77□□□□□ -0.53
TTC39A-216ENST00000530004 TMEM249Q2WGJ8 235 aa11.77□□□□□ -0.53
TTC39A-216ENST00000530004 SPNS3Q6ZMD2 512 aa11.77□□□□□ -0.53
TTC39A-216ENST00000530004 SLC25A48Q6ZT89 311 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms