RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ARL11Q969Q4 196 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 CREB3L1Q96BA8 519 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 TM2D1Q9BX74 207 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 NPFFR1Q9GZQ6 430 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 SRRQ9GZT4 340 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 C6orf62Q9GZU0 229 aaPredicted RBP6.73□□□□□ -1.33
SSBP3-212ENST00000528930 CST11Q9H112 138 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 SERTAD4Q9NUC0 356 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 MED9Q9NWA0 146 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 GFOD1Q9NXC2 390 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 AK6Q9Y3D8 172 aaKnown RBP6.73□□□□□ -1.33
SSBP3-212ENST00000528930 A0A0A6YYD4 124 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 A0A1W2PPE3 182 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 SHISA3A0PJX4 238 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 UBE2QL1A1L167 161 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 OOSP1A8MZH6 123 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 C12orf77C9JDV5 145 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 H3BS24 57 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 PDCD6O75340 191 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 CA11O75493 328 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 ARL6IP5O75915 188 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 JTBO76095 146 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 IGLL1P15814 213 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 RCC1P18754 421 aaPredicted RBP6.72□□□□□ -1.33
SSBP3-212ENST00000528930 MYL9P24844 172 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 CHATP28329 748 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 BRS3P32247 399 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 CEACAM3P40198 252 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 HTR2BP41595 481 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 GNG10P50151 68 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 ZFAND6Q6FIF0 208 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 C11orf88Q6PI97 169 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 Q6ZTK2 550 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 C5orf24Q7Z6I8 188 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 LINC00311Q8N616 119 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 WFDC9Q8NEX5 89 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 OR2T6Q8NHC8 308 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 KCNG3Q8TAE7 436 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 MRPL30Q8TCC3 161 aaKnown RBP6.72□□□□□ -1.33
SSBP3-212ENST00000528930 WIPF2Q8TF74 440 aaPredicted RBP6.72□□□□□ -1.33
SSBP3-212ENST00000528930 SNAPC3Q92966 411 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 SOSTQ9BQB4 213 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 SULT4A1Q9BR01 284 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 NICN1Q9BSH3 213 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 ELF5Q9UKW6 265 aaPredicted RBP6.72□□□□□ -1.33
SSBP3-212ENST00000528930 HERC1Q15751 4861 aa6.72□□□□□ -1.33
SSBP3-212ENST00000528930 IGHV3-43A0A0B4J1X8 118 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 A0A1W2PPI3 338 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 FOXI3A8MTJ6 420 aaPredicted RBP6.71□□□□□ -1.34
SSBP3-212ENST00000528930 H3BUI4 141 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 SDCBPO00560 298 aaPredicted RBP6.71□□□□□ -1.34
SSBP3-212ENST00000528930 SLC17A2O00624 439 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 SLC22A5O76082 557 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 OR2F2O95006 317 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 BPNT1O95861 308 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 HBZP02008 142 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 AMY1AP04745 511 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 AMY2AP04746 511 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 IGHV3-43DP0DP04 118 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 ZNF134P52741 427 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 LSM3P62310 102 aaKnown RBP6.71□□□□□ -1.34
SSBP3-212ENST00000528930 P2RY14Q15391 338 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 Q3ZCU0 254 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 Q5BKY6 102 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 CLLU1Q5K131 121 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 CCDC144NLQ6NUI1 221 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 CD200R1LQ6Q8B3 271 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 C16orf82Q7Z2V1 217 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 THNSL2Q86YJ6 484 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 SLC38A6Q8IZM9 456 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 FAM89BQ8N5H3 189 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 KLHDC1Q8N7A1 406 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 C8orf31Q8N9H6 132 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 DTX3Q8N9I9 347 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 ZNF439Q8NDP4 499 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 OR1L1Q8NH94 360 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 AP3S1Q92572 193 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 TOMM40LQ969M1 308 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 ST6GALNAC6Q969X2 333 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 RBM14Q96PK6 669 aaKnown RBP6.71□□□□□ -1.34
SSBP3-212ENST00000528930 MARVELD1Q9BSK0 173 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 SLC25A33Q9BSK2 321 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 FAAP24Q9BTP7 215 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 TMEM59Q9BXS4 323 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 PRSS22Q9GZN4 317 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 WNT10AQ9GZT5 417 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 LPAR5Q9H1C0 372 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 TAF9BQ9HBM6 251 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 NDUFB11Q9NX14 153 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 TRAPPC2LQ9UL33 140 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 AMMECR1Q9Y4X0 333 aaPredicted RBP6.71□□□□□ -1.34
SSBP3-212ENST00000528930 V9GYH0 126 aa6.71□□□□□ -1.34
SSBP3-212ENST00000528930 PLECQ15149 4684 aaKnown RBP6.7□□□□□ -1.34
SSBP3-212ENST00000528930 TRAV1-2A0A0B4J238 106 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 TRDV1A0A1B0GX56 115 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 FAM25EA8MYX2 175 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 LDLRAD4O15165 306 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 SLC31A2O15432 143 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 SOCS1O15524 211 aa6.7□□□□□ -1.34
SSBP3-212ENST00000528930 SPINT2O43291 252 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms