RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 OPN3Q9H1Y3 402 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-214ENST00000528165 PROK2Q9HC23 129 aa12.4□□□□□ -0.42
CAPN1-214ENST00000528165 CABIN1Q9Y6J0 2220 aa12.4□□□□□ -0.43
CAPN1-214ENST00000528165 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-214ENST00000528165 NDUFB4O95168 129 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 CDC34P49427 236 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-214ENST00000528165 GNB1P62873 340 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 OR5I1Q13606 314 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 RIPPLY2Q5TAB7 128 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 DMRTA1Q5VZB9 504 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 COLCA1Q6ZS62 124 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 SLC25A45Q8N413 288 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 HLA-CQ95604 372 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 SFRP2Q96HF1 295 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 NPCDR1Q9BY65 106 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 SDK2Q58EX2 2172 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 MDFIC2A0A1B0GVS7 189 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 NPIPB11E5RHQ5 1161 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 ZNHIT1O43257 154 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 CBR3O75828 277 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 DEFA4P12838 97 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 SELEP16581 610 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 UBE2G2P60604 165 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 SDK1Q7Z5N4 2213 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 KIAA1549Q9HCM3 1950 aa12.39□□□□□ -0.43
CAPN1-214ENST00000528165 TRAV39A0A0B4J263 110 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 CXCL13O43927 109 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 BMP5P22003 454 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 HSPB9Q9BQS6 159 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 DERL1Q9BUN8 251 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 CLN8Q9UBY8 286 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 HSPB7Q9UBY9 170 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 LAMA1P25391 3075 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 C17orf112F2Z3M2 114 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 SYNGR4O95473 234 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 UMODP07911 640 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 KITLGP21583 273 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 SSR4P51571 173 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 YPEL3P61236 119 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-214ENST00000528165 PCOLCEQ15113 449 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 MSMO1Q15800 293 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 YRDCQ86U90 279 aaKnown RBP12.38□□□□□ -0.43
CAPN1-214ENST00000528165 VN1R17PQ8TDU5 208 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 DLL3Q9NYJ7 618 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 DOCK11Q5JSL3 2073 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 PGPEP1LA6NFU8 196 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 RNF212BA8MTL3 300 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 F6UZH7 168 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 IGHV3-9P01782 118 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 IL6RP08887 468 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-214ENST00000528165 CCL2P13500 99 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 ATP5G3P48201 142 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 MLF1P58340 268 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 OR5A2Q8NGI9 324 aa12.38□□□□□ -0.43
CAPN1-214ENST00000528165 KRASP01116 189 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 SERPINA7P05543 415 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 CRISP2P16562 243 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 SPINK2P20155 84 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 RPS16P62249 146 aaKnown RBP12.37□□□□□ -0.43
CAPN1-214ENST00000528165 SELENOTP62341 195 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 HLA-BQ31612 363 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 COL5A1-AS1Q5SY13 56 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 FAM58AQ8N1B3 248 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 DRAM1Q8N682 238 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 OR5AU1Q8NGC0 362 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 OR1L1Q8NH94 360 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 UBALD1Q8TB05 177 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 ZNF552Q9H707 407 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-214ENST00000528165 AKIRIN1Q9H9L7 192 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-214ENST00000528165 KCNIP2Q9NS61 270 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 SPTBN5Q9NRC6 3674 aaKnown RBP12.37□□□□□ -0.43
CAPN1-214ENST00000528165 C5orf49A4QMS7 147 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 SERF1AO75920 110 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 CD82P27701 267 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 CDKN1AP38936 164 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 SLC23A3Q6PIS1 610 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 ZNF114Q8NC26 417 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 SAMD10Q9BYL1 202 aa12.37□□□□□ -0.43
CAPN1-214ENST00000528165 RBFOX2O43251 390 aaKnown RBP eCLIP12.36□□□□□ -0.43
CAPN1-214ENST00000528165 OR5P3Q8WZ94 311 aa12.36□□□□□ -0.43
CAPN1-214ENST00000528165 TRAPPC2LQ9UL33 140 aa12.36□□□□□ -0.43
CAPN1-214ENST00000528165 TP53TG3Q9ULZ0 132 aa12.36□□□□□ -0.43
CAPN1-214ENST00000528165 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
CAPN1-214ENST00000528165 SIAH2O43255 324 aa12.36□□□□□ -0.43
CAPN1-214ENST00000528165 MOB1BQ7L9L4 216 aa12.36□□□□□ -0.43
CAPN1-214ENST00000528165 BAGE3Q86Y29 109 aa12.36□□□□□ -0.43
CAPN1-214ENST00000528165 BAGE2Q86Y30 109 aa12.36□□□□□ -0.43
CAPN1-214ENST00000528165 CADM4Q8NFZ8 388 aa12.36□□□□□ -0.43
CAPN1-214ENST00000528165 PMS2P5A8MQ11 134 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 CBLN1P23435 193 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 G6PCP35575 357 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 B3GALT5-AS1P59052 145 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 ZNF90Q03938 601 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 GGNQ86UU5 652 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 DTD1Q8TEA8 209 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 KCNE4Q8WWG9 221 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-214ENST00000528165 LRRC30A6NM36 301 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 ESDP10768 282 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 TFPI2P48307 235 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms