RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 QRFPP83859 136 aa17.31■□□□□ 0.36
TRAPPC4-208ENST00000527680 LIPKQ5VXJ0 399 aa17.31■□□□□ 0.36
TRAPPC4-208ENST00000527680 PYHIN1Q6K0P9 492 aa17.31■□□□□ 0.36
TRAPPC4-208ENST00000527680 RNF5Q99942 180 aa17.31■□□□□ 0.36
TRAPPC4-208ENST00000527680 LPAR5Q9H1C0 372 aa17.31■□□□□ 0.36
TRAPPC4-208ENST00000527680 OR1A1Q9P1Q5 309 aa17.31■□□□□ 0.36
TRAPPC4-208ENST00000527680 ZNF221Q9UK13 617 aa17.31■□□□□ 0.36
TRAPPC4-208ENST00000527680 MGAT4AQ9UM21 535 aa17.31■□□□□ 0.36
TRAPPC4-208ENST00000527680 IGHV4OR15-8A0A075B7B6 117 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 A0A087WW49 117 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 A0A0A6YYD4 124 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 ITGB1BP1O14713 200 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 UCHL1P09936 223 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 EGR2P11161 476 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 SPNP16150 400 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 CRIP2P52943 208 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 OVCH2Q7RTZ1 564 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 LFNGQ8NES3 379 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 OR5AN1Q8NGI8 311 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 UFD1Q92890 307 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 FLYWCH2Q96CP2 140 aaKnown RBP17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 OR4C12Q96R67 309 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 AGMATQ9BSE5 352 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 ZNF355PQ9NSJ1 428 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 GAB2Q9UQC2 676 aa17.3■□□□□ 0.36
TRAPPC4-208ENST00000527680 TRBV6-6A0A0A6YYG2 114 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 C3orf84H3BNL1 204 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 HSPB1P04792 205 aaKnown RBP17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 SCTP09683 121 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 HSMCR30P0CW71 290 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 TPPP2P59282 170 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 HLA-DRB3P79483 266 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 PSG5Q15238 335 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 AKIRIN2Q53H80 203 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 C19orf54Q5BKX5 351 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 CD200R1LQ6Q8B3 271 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 ZNF562Q6V9R5 426 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 SBSPONQ8IVN8 264 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 OR6Q1Q8NGQ2 317 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 ARPC1AQ92747 370 aa17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 TSNAXQ99598 290 aaKnown RBP17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 AK6Q9Y3D8 172 aaKnown RBP17.29■□□□□ 0.36
TRAPPC4-208ENST00000527680 CASQ2O14958 399 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC4-208ENST00000527680 VEGFCP49767 419 aa17.28■□□□□ 0.36
TRAPPC4-208ENST00000527680 PITPNAQ00169 270 aa17.28■□□□□ 0.36
TRAPPC4-208ENST00000527680 ACSM6Q6P461 480 aa17.28■□□□□ 0.36
TRAPPC4-208ENST00000527680 CMSS1Q9BQ75 279 aaKnown RBP17.28■□□□□ 0.36
TRAPPC4-208ENST00000527680 Q9N2K0 584 aa17.28■□□□□ 0.36
TRAPPC4-208ENST00000527680 LSM2Q9Y333 95 aaKnown RBP17.28■□□□□ 0.36
TRAPPC4-208ENST00000527680 SLC17A2O00624 439 aa17.27■□□□□ 0.36
TRAPPC4-208ENST00000527680 CA2P00918 260 aa17.27■□□□□ 0.36
TRAPPC4-208ENST00000527680 TRGV3P03979 118 aa17.27■□□□□ 0.36
TRAPPC4-208ENST00000527680 OR8U9P0C7N5 309 aa17.27■□□□□ 0.36
TRAPPC4-208ENST00000527680 CD37P11049 281 aa17.27■□□□□ 0.36
TRAPPC4-208ENST00000527680 GP9P14770 177 aa17.27■□□□□ 0.36
TRAPPC4-208ENST00000527680 RAB11BQ15907 218 aa17.27■□□□□ 0.36
TRAPPC4-208ENST00000527680 FAM89BQ8N5H3 189 aa17.27■□□□□ 0.36
TRAPPC4-208ENST00000527680 ARHGAP5-AS1Q96IT6 56 aa17.27■□□□□ 0.36
TRAPPC4-208ENST00000527680 C12orf4Q9NQ89 552 aa17.27■□□□□ 0.36
TRAPPC4-208ENST00000527680 TPSG1Q9NRR2 321 aa17.27■□□□□ 0.36
TRAPPC4-208ENST00000527680 HSF4Q9ULV5 492 aa17.27■□□□□ 0.36
TRAPPC4-208ENST00000527680 CNIH1O95406 144 aa17.26■□□□□ 0.35
TRAPPC4-208ENST00000527680 APOA2P02652 100 aa17.26■□□□□ 0.35
TRAPPC4-208ENST00000527680 TFAP2AP05549 437 aa17.26■□□□□ 0.35
TRAPPC4-208ENST00000527680 LINC00205P59089 165 aa17.26■□□□□ 0.35
TRAPPC4-208ENST00000527680 FXYD3Q14802 87 aa17.26■□□□□ 0.35
TRAPPC4-208ENST00000527680 GRPEL2Q8TAA5 225 aa17.26■□□□□ 0.35
TRAPPC4-208ENST00000527680 RCHY1Q96PM5 261 aa17.26■□□□□ 0.35
TRAPPC4-208ENST00000527680 ELOVL1Q9BW60 279 aa17.26■□□□□ 0.35
TRAPPC4-208ENST00000527680 SLA2Q9H6Q3 261 aa17.26■□□□□ 0.35
TRAPPC4-208ENST00000527680 TPRKBQ9Y3C4 175 aa17.26■□□□□ 0.35
TRAPPC4-208ENST00000527680 ARL6IP5O75915 188 aa17.25■□□□□ 0.35
TRAPPC4-208ENST00000527680 IGKV1-16P04430 117 aa17.25■□□□□ 0.35
TRAPPC4-208ENST00000527680 TMEM50BP56557 158 aa17.25■□□□□ 0.35
TRAPPC4-208ENST00000527680 CLDN12P56749 244 aa17.25■□□□□ 0.35
TRAPPC4-208ENST00000527680 MRPS15P82914 257 aaKnown RBP17.25■□□□□ 0.35
TRAPPC4-208ENST00000527680 ZNF383Q8NA42 475 aa17.25■□□□□ 0.35
TRAPPC4-208ENST00000527680 PTX4Q96A99 478 aa17.25■□□□□ 0.35
TRAPPC4-208ENST00000527680 PECRQ9BY49 303 aa17.25■□□□□ 0.35
TRAPPC4-208ENST00000527680 TRDCB7Z8K6 153 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 M0R1X1 148 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 SLC25A17O43808 307 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 PROP1O75360 226 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 FRMD6-AS1P0C7T7 363 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 SNRPBP14678 240 aaKnown RBP17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 RPS25P62851 125 aaKnown RBP17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 TRAM1Q15629 374 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 SRSF7Q16629 238 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 C2orf76Q3KRA6 126 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 TMEM91Q6ZNR0 172 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 PDPNQ86YL7 162 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 OR5T1Q8NG75 326 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 OR56B1Q8NGI3 324 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 RHOVQ96L33 236 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 GFI1Q99684 422 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 RSRP1Q9BUV0 290 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 CCDC90BQ9GZT6 254 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 ZMAT4Q9H898 229 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 RDH8Q9NYR8 311 aa17.24■□□□□ 0.35
TRAPPC4-208ENST00000527680 C13orf42A0A1B0GVH6 325 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms