RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ADGRG7Q96K78 797 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 PSMG3Q9BT73 122 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-208ENST00000527323 SRD5A3Q9H8P0 318 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 DLL3Q9NYJ7 618 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 NCKAP5O14513 1909 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 A0A1W2PR80 420 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 PINLYPA6NC86 204 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 B4E171 279 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 DLL1O00548 723 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 DEGS1O15121 323 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 CLDN1O95832 211 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 PLA2G5P39877 138 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 GALR1P47211 349 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 COL27A1Q8IZC6 1860 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-208ENST00000527323 A0A1W2PPQ1 181 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 FAM166BA8MTA8 275 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 IGKV1-39P01597 117 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 IGKV1D-39P04432 117 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 CYC1P08574 325 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 CELA3AP09093 270 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 SLC25A6P12236 298 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 PSMB3P49720 205 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 SLC38A11Q08AI6 406 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 ABLIM2Q6H8Q1 611 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 C1orf122Q6ZSJ8 110 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 HAPLN4Q86UW8 402 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 FAM58AQ8N1B3 248 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 OR1P1Q8NH06 330 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 PRRG4Q9BZD6 226 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 WDR61Q9GZS3 305 aaKnown RBP10.6□□□□□ -0.71
CAPN1-208ENST00000527323 SLC25A22Q9H936 323 aa10.6□□□□□ -0.71
CAPN1-208ENST00000527323 SLC31A2O15432 143 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 AMBPP02760 352 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 MEF2BQ02080 365 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-208ENST00000527323 JOSD1Q15040 202 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-208ENST00000527323 SSX2Q16385 188 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 C3AR1Q16581 482 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 DNLZQ5SXM8 178 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 COLCA1Q6ZS62 124 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 OR5A2Q8NGI9 324 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 TAF15Q92804 592 aaKnown RBP eCLIP10.59□□□□□ -0.71
CAPN1-208ENST00000527323 APOBEC3DQ96AK3 386 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-208ENST00000527323 PCGF1Q9BSM1 259 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 CDH20Q9HBT6 801 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 DEPPQ9NTK1 212 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 TRAPPC2LQ9UL33 140 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 TNRC6AQ8NDV7 1962 aaKnown RBP10.59□□□□□ -0.71
CAPN1-208ENST00000527323 TRAV24A0A0B4J272 114 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 ANKRD30BLA7E2S9 258 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 IGKV1-5P01602 117 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 FIP1L1Q6UN15 594 aaKnown RBP10.59□□□□□ -0.71
CAPN1-208ENST00000527323 OR4F5Q8NH21 305 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 OR5R1Q8NH85 324 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 LSM10Q969L4 123 aaKnown RBP10.59□□□□□ -0.71
CAPN1-208ENST00000527323 OR4F4Q96R69 305 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 DVL1O14640 695 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 PFN1P07737 140 aaKnown RBP10.59□□□□□ -0.71
CAPN1-208ENST00000527323 GZMBP10144 247 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 FOXG1P55316 489 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-208ENST00000527323 RPS16P62249 146 aaKnown RBP10.59□□□□□ -0.71
CAPN1-208ENST00000527323 PMP22Q01453 160 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 RTP5Q14D33 572 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 IGFBP7Q16270 282 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 Q3ZCU0 254 aa10.59□□□□□ -0.71
CAPN1-208ENST00000527323 RPP25LQ8N5L8 163 aaKnown RBP10.59□□□□□ -0.71
CAPN1-208ENST00000527323 LRRC3CA6NJW4 275 aa10.58□□□□□ -0.72
CAPN1-208ENST00000527323 CYTIPO60759 359 aa10.58□□□□□ -0.72
CAPN1-208ENST00000527323 RNPS1Q15287 305 aaKnown RBP10.58□□□□□ -0.72
CAPN1-208ENST00000527323 DMRTC2Q8IXT2 367 aaPredicted RBP10.58□□□□□ -0.72
CAPN1-208ENST00000527323 MISP3Q96FF7 219 aa10.58□□□□□ -0.72
CAPN1-208ENST00000527323 LURAP1Q96LR2 239 aa10.58□□□□□ -0.72
CAPN1-208ENST00000527323 SIRPB1O00241 398 aa10.58□□□□□ -0.72
CAPN1-208ENST00000527323 RPL23P62829 140 aaKnown RBP10.58□□□□□ -0.72
CAPN1-208ENST00000527323 PLP2Q04941 152 aa10.58□□□□□ -0.72
CAPN1-208ENST00000527323 P2RY6Q15077 328 aa10.58□□□□□ -0.72
CAPN1-208ENST00000527323 CYP2G1PQ6ZSU1 146 aa10.58□□□□□ -0.72
CAPN1-208ENST00000527323 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.58□□□□□ -0.72
CAPN1-208ENST00000527323 ZNF573Q86YE8 665 aa10.58□□□□□ -0.72
CAPN1-208ENST00000527323 KBTBD11O94819 623 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 GZMHP20718 246 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 TAS2R60P59551 318 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 DCAF10Q5QP82 559 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 TUSC5Q8IXB3 177 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 ZNF664Q8N3J9 261 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 DIDO1Q9BTC0 2240 aaKnown RBP10.57□□□□□ -0.72
CAPN1-208ENST00000527323 ELOVL1Q9BW60 279 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 SPRY4Q9C004 299 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 OR51I2Q9H344 312 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 FUT9Q9Y231 359 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 IGHV3-64DA0A0J9YX35 117 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 LRP5LA4QPB2 252 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 RHBDL1O75783 438 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 IGKV1D-33P01593 117 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 IGKV1-33P01594 117 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 FGFRL1Q8N441 504 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 OR51G1Q8NGK1 321 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 GATAD1Q8WUU5 269 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 PARLQ9H300 379 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 LIN7CQ9NUP9 197 aaKnown RBP10.57□□□□□ -0.72
CAPN1-208ENST00000527323 ESPL1Q14674 2120 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms