RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 RANGRFQ9HD47 186 aaPredicted RBP12.33□□□□□ -0.44
PTPRU-210ENST00000527027 GHRLQ9UBU3 117 aa12.33□□□□□ -0.44
PTPRU-210ENST00000527027 SLC23A1Q9UHI7 598 aa12.33□□□□□ -0.44
PTPRU-210ENST00000527027 CLEC2DQ9UHP7 191 aa12.33□□□□□ -0.44
PTPRU-210ENST00000527027 DIMT1Q9UNQ2 313 aaKnown RBP12.33□□□□□ -0.44
PTPRU-210ENST00000527027 EXOSC1Q9Y3B2 195 aaKnown RBP12.33□□□□□ -0.44
PTPRU-210ENST00000527027 EFCAB10A6NFE3 127 aa12.32□□□□□ -0.44
PTPRU-210ENST00000527027 H0YJW9 148 aa12.32□□□□□ -0.44
PTPRU-210ENST00000527027 H7C2Y5 167 aa12.32□□□□□ -0.44
PTPRU-210ENST00000527027 TRGV3P03979 118 aa12.32□□□□□ -0.44
PTPRU-210ENST00000527027 IFNA6P05013 189 aa12.32□□□□□ -0.44
PTPRU-210ENST00000527027 ZP3P21754 424 aa12.32□□□□□ -0.44
PTPRU-210ENST00000527027 RPL39P5Q59GN2 51 aa12.32□□□□□ -0.44
PTPRU-210ENST00000527027 GLDNQ6ZMI3 551 aaPredicted RBP12.32□□□□□ -0.44
PTPRU-210ENST00000527027 ZFP41Q8N8Y5 198 aa12.32□□□□□ -0.44
PTPRU-210ENST00000527027 IL1F10Q8WWZ1 152 aa12.32□□□□□ -0.44
PTPRU-210ENST00000527027 FAM46BQ96A09 425 aa12.32□□□□□ -0.44
PTPRU-210ENST00000527027 NEDD4LQ96PU5 975 aa12.32□□□□□ -0.44
PTPRU-210ENST00000527027 WASHC3Q9Y3C0 194 aa12.32□□□□□ -0.44
PTPRU-210ENST00000527027 H0Y980 276 aa12.31□□□□□ -0.44
PTPRU-210ENST00000527027 PSG5Q15238 335 aa12.31□□□□□ -0.44
PTPRU-210ENST00000527027 ZNF485Q8NCK3 441 aa12.31□□□□□ -0.44
PTPRU-210ENST00000527027 OR5AN1Q8NGI8 311 aa12.31□□□□□ -0.44
PTPRU-210ENST00000527027 SULT4A1Q9BR01 284 aa12.31□□□□□ -0.44
PTPRU-210ENST00000527027 UQCC2Q9BRT2 126 aa12.31□□□□□ -0.44
PTPRU-210ENST00000527027 FAAP24Q9BTP7 215 aa12.31□□□□□ -0.44
PTPRU-210ENST00000527027 METTL1Q9UBP6 276 aaKnown RBP12.31□□□□□ -0.44
PTPRU-210ENST00000527027 SLC22A1O15245 554 aa12.3□□□□□ -0.44
PTPRU-210ENST00000527027 MRPS14O60783 128 aaKnown RBP12.3□□□□□ -0.44
PTPRU-210ENST00000527027 CA2P00918 260 aa12.3□□□□□ -0.44
PTPRU-210ENST00000527027 KLF5Q13887 457 aaPredicted RBP12.3□□□□□ -0.44
PTPRU-210ENST00000527027 NKAIN3Q8N8D7 197 aa12.3□□□□□ -0.44
PTPRU-210ENST00000527027 BPIFB6Q8NFQ5 453 aa12.3□□□□□ -0.44
PTPRU-210ENST00000527027 TMEM80Q96HE8 168 aa12.3□□□□□ -0.44
PTPRU-210ENST00000527027 ABHD14BQ96IU4 210 aa12.3□□□□□ -0.44
PTPRU-210ENST00000527027 DERL3Q96Q80 235 aa12.3□□□□□ -0.44
PTPRU-210ENST00000527027 AGMATQ9BSE5 352 aa12.3□□□□□ -0.44
PTPRU-210ENST00000527027 TUBA4BQ9H853 241 aa12.3□□□□□ -0.44
PTPRU-210ENST00000527027 ZNF355PQ9NSJ1 428 aa12.3□□□□□ -0.44
PTPRU-210ENST00000527027 HYDINQ4G0P3 5121 aa12.29□□□□□ -0.44
PTPRU-210ENST00000527027 TNCP24821 2201 aa12.29□□□□□ -0.44
PTPRU-210ENST00000527027 A0A0G2JLM5 398 aa12.29□□□□□ -0.44
PTPRU-210ENST00000527027 C13orf42A0A1B0GVH6 325 aa12.29□□□□□ -0.44
PTPRU-210ENST00000527027 ITGB1BP1O14713 200 aa12.29□□□□□ -0.44
PTPRU-210ENST00000527027 JTBO76095 146 aa12.29□□□□□ -0.44
PTPRU-210ENST00000527027 SNRPBP14678 240 aaKnown RBP12.29□□□□□ -0.44
PTPRU-210ENST00000527027 MOGAT2Q3SYC2 334 aa12.29□□□□□ -0.44
PTPRU-210ENST00000527027 IL34Q6ZMJ4 242 aa12.29□□□□□ -0.44
PTPRU-210ENST00000527027 C6orf201Q7Z4U5 140 aa12.29□□□□□ -0.44
PTPRU-210ENST00000527027 SVOPQ8N4V2 548 aa12.29□□□□□ -0.44
PTPRU-210ENST00000527027 POC5Q8NA72 575 aa12.29□□□□□ -0.44
PTPRU-210ENST00000527027 OR9G4Q8NGQ1 327 aa12.29□□□□□ -0.44
PTPRU-210ENST00000527027 TSNAXQ99598 290 aaKnown RBP12.29□□□□□ -0.44
PTPRU-210ENST00000527027 PARP12Q9H0J9 701 aaKnown RBP12.29□□□□□ -0.44
PTPRU-210ENST00000527027 ANKRD34BA5PLL1 514 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 H3BUA1 57 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 NAPSAO96009 420 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 UBBP0CG47 229 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 CPEP16870 476 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 TAS2R43P59537 309 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 GABARAPL2P60520 117 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 RPS16P62249 146 aaKnown RBP12.28□□□□□ -0.44
PTPRU-210ENST00000527027 FXYD3Q14802 87 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 ZNF880Q6PDB4 577 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 OR5T1Q8NG75 326 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 IL17DQ8TAD2 202 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 THAP7Q9BT49 309 aaPredicted RBP12.28□□□□□ -0.44
PTPRU-210ENST00000527027 TMED9Q9BVK6 235 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 CHMP1AQ9HD42 196 aaPredicted RBP12.28□□□□□ -0.44
PTPRU-210ENST00000527027 PSORS1C1Q9UIG5 152 aa12.28□□□□□ -0.44
PTPRU-210ENST00000527027 PLECQ15149 4684 aaKnown RBP12.27□□□□□ -0.44
PTPRU-210ENST00000527027 PNMA8CA0A1B0GUJ8 204 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 PROP1O75360 226 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 SPDEFO95238 335 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 HTR2CP28335 458 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 SYNJ2BPP57105 145 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 RPS27AP62979 156 aaKnown RBP12.27□□□□□ -0.45
PTPRU-210ENST00000527027 OR10K2Q6IF99 312 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 GTSCR1Q86UQ5 136 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 DRAXINQ8NBI3 349 aaPredicted RBP12.27□□□□□ -0.45
PTPRU-210ENST00000527027 GRPEL2Q8TAA5 225 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 SETD6Q8TBK2 473 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 EDARADDQ8WWZ3 215 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 THRSPQ92748 146 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 GGHQ92820 318 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 C11orf54Q9H0W9 315 aaPredicted RBP12.27□□□□□ -0.45
PTPRU-210ENST00000527027 SIGLEC8Q9NYZ4 499 aa12.27□□□□□ -0.45
PTPRU-210ENST00000527027 TNFAIP8O95379 198 aa12.26□□□□□ -0.45
PTPRU-210ENST00000527027 IGKV1-16P04430 117 aa12.26□□□□□ -0.45
PTPRU-210ENST00000527027 CD1AP06126 327 aa12.26□□□□□ -0.45
PTPRU-210ENST00000527027 CELP19835 753 aa12.26□□□□□ -0.45
PTPRU-210ENST00000527027 ZBTB25P24278 435 aa12.26□□□□□ -0.45
PTPRU-210ENST00000527027 CRHBPP24387 322 aa12.26□□□□□ -0.45
PTPRU-210ENST00000527027 MAPK3P27361 379 aaPredicted RBP12.26□□□□□ -0.45
PTPRU-210ENST00000527027 CEACAM6P40199 344 aa12.26□□□□□ -0.45
PTPRU-210ENST00000527027 TATDN3Q17R31 274 aa12.26□□□□□ -0.45
PTPRU-210ENST00000527027 RNLSQ5VYX0 342 aa12.26□□□□□ -0.45
PTPRU-210ENST00000527027 LCN12Q6JVE5 192 aa12.26□□□□□ -0.45
PTPRU-210ENST00000527027 MOB1BQ7L9L4 216 aa12.26□□□□□ -0.45
PTPRU-210ENST00000527027 RIMS4Q9H426 269 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms