RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 IGFBP7Q16270 282 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 MAPK14Q16539 360 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 HIST3H3Q16695 136 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 OR10K2Q6IF99 312 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 PP632Q6XCG6 107 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 RASSF6Q6ZTQ3 369 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 GID4Q8IVV7 300 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 BPIFB6Q8NFQ5 453 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 JOSD2Q8TAC2 188 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 RMI2Q96E14 147 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 CCDC42Q96M95 316 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 OR52B2Q96RD2 323 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 KCNIP2Q9NS61 270 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 SLC23A2Q9UGH3 650 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 SLC22A13Q9Y226 551 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 ZNF337Q9Y3M9 751 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 PCYT1BQ9Y5K3 369 aaPredicted RBP2.48□□□□□ -2.01
CSDE1-211ENST00000525970 PRR14LQ5THK1 2151 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 OTOFQ9HC10 1997 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 ZFYVE9O95405 1425 aa2.48□□□□□ -2.01
CSDE1-211ENST00000525970 KCNK1O00180 336 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 OPN1SWP03999 348 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 CD36P16671 472 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 OR10J1P30954 320 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 CCR7P32248 378 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 GABRA3P34903 492 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 TCL1AP56279 114 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 CTBP2P56545 445 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 KLF3P57682 345 aaPredicted RBP2.47□□□□□ -2.01
CSDE1-211ENST00000525970 CCL7P80098 99 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 EMX1Q04741 257 aaPredicted RBP2.47□□□□□ -2.01
CSDE1-211ENST00000525970 UAP1Q16222 522 aaPredicted RBP2.47□□□□□ -2.01
CSDE1-211ENST00000525970 C8orf74Q6P047 294 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 ZNF550Q7Z398 422 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 LYZL2Q7Z4W2 148 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 C1orf158Q8N1D5 194 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 TMEM86BQ8N661 226 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 OR5P3Q8WZ94 311 aa2.47□□□□□ -2.01
CSDE1-211ENST00000525970 PAIP2Q9BPZ3 127 aaKnown RBP2.47□□□□□ -2.01
CSDE1-211ENST00000525970 NCOA2Q15596 1464 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 CCDC18Q5T9S5 1454 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 ARHGAP35Q9NRY4 1499 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 MROH2BQ7Z745 1585 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 SSH2Q76I76 1423 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 K7EQS6 105 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 M0R381 172 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 KPNA3O00505 521 aaPredicted RBP2.46□□□□□ -2.02
CSDE1-211ENST00000525970 STK16O75716 305 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 ATP5HO75947 161 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 RPP14O95059 124 aaKnown RBP2.46□□□□□ -2.02
CSDE1-211ENST00000525970 AP3S2P59780 193 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 STX5Q13190 355 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 RSU1Q15404 277 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 TMEM31Q5JXX7 168 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 C1orf194Q5T5A4 169 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 ZNF660Q6AZW8 331 aaPredicted RBP2.46□□□□□ -2.02
CSDE1-211ENST00000525970 IGFL1Q6UW32 110 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 Q8NAQ8 132 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 ANKRD36BP1Q96IX9 119 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 UPK3BQ9BT76 320 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 EMC3Q9P0I2 261 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 DNAJC12Q9UKB3 198 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 R4GN34 69 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 TOP2AP11388 1531 aaKnown RBP2.46□□□□□ -2.02
CSDE1-211ENST00000525970 DICER1Q9UPY3 1922 aaKnown RBP2.46□□□□□ -2.02
CSDE1-211ENST00000525970 COL18A1P39060 1754 aa2.46□□□□□ -2.02
CSDE1-211ENST00000525970 ARAP1Q96P48 1450 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 RAPGEF2Q9Y4G8 1499 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 CRB1P82279 1406 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 TGIF2-C20orf24A0A0A6YYL0 155 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 A0A1B0GU33 70 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 TMEM114B3SHH9 223 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 C15orf65H3BRN8 121 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 IFNA6P05013 189 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 CD7P09564 240 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 IGHV3-30-3P0DP02 117 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 ZNF14P17017 642 aaPredicted RBP2.45□□□□□ -2.02
CSDE1-211ENST00000525970 CCL1P22362 96 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 RAP1GDS1P52306 607 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 GTF2A1P52655 376 aaPredicted RBP2.45□□□□□ -2.02
CSDE1-211ENST00000525970 AESQ08117 197 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 BIKQ13323 160 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 KRTAP25-1Q3LHN0 102 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 PYCR3Q53H96 274 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 WDR59Q6PJI9 974 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 ALKAL1Q6UXT8 129 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 TRAPPC5Q8IUR0 188 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 C1orf174Q8IYL3 243 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 LY6G5BQ8NDX9 201 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 ZNF680Q8NEM1 530 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 C1orf64Q8NEQ6 169 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 MFSD8Q8NHS3 518 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 ANKRD7Q92527 254 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 HIST1H2BAQ96A08 127 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 SLC35G5Q96KT7 338 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 OR51I2Q9H344 312 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 IL20Q9NYY1 176 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 WASHC3Q9Y3C0 194 aa2.45□□□□□ -2.02
CSDE1-211ENST00000525970 FIS1Q9Y3D6 152 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms