RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 HBZP02008 142 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 FUT3P21217 361 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 RAG2P55895 527 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 FAM3BP58499 235 aaPredicted RBP4.12□□□□□ -1.75
SVIP-202ENST00000525670 QRFPP83859 136 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 MEF2CQ06413 473 aaPredicted RBP4.12□□□□□ -1.75
SVIP-202ENST00000525670 GPR176Q14439 515 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 HES1Q14469 280 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 HNF4GQ14541 408 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 LRRC75BQ2VPJ9 315 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 C2orf76Q3KRA6 126 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 C9orf152Q5JTZ5 239 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 C1orf100Q5SVJ3 147 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 GPR107Q5VW38 600 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 SPSB3Q6PJ21 355 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 C12orf54Q6X4T0 127 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 ZNF497Q6ZNH5 498 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 C1orf122Q6ZSJ8 110 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 Q6ZSV7 163 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 C9orf139Q6ZV77 190 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 LINC00596Q86U02 117 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 OR2C3Q8N628 320 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 TMEM217Q8N7C4 229 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 OR4P4Q8NGL7 312 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 OR10X1Q8NGY0 326 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 OR56B4Q8NH76 319 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 KCNG3Q8TAE7 436 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 FAM110DQ8TAY7 271 aaPredicted RBP4.12□□□□□ -1.75
SVIP-202ENST00000525670 SSMEM1Q8WWF3 244 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 TOMM40LQ969M1 308 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 KCTD7Q96MP8 289 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 PECRQ9BY49 303 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 YTHDF1Q9BYJ9 559 aaKnown RBP4.12□□□□□ -1.75
SVIP-202ENST00000525670 BARHL1Q9BZE3 327 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 ATG5Q9H1Y0 275 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 HEXA-AS1Q9H8Q6 139 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 PLEKHJ1Q9NW61 149 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 OR6C3Q9NZP0 311 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 OR1A1Q9P1Q5 309 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 RCC2Q9P258 522 aaKnown RBP4.12□□□□□ -1.75
SVIP-202ENST00000525670 ZNF230Q9UIE0 474 aaPredicted RBP4.12□□□□□ -1.75
SVIP-202ENST00000525670 VPREB3Q9UKI3 123 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 PSG11Q9UQ72 335 aa4.12□□□□□ -1.75
SVIP-202ENST00000525670 TRAV1-2A0A0B4J238 106 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 TMEM235A6NFC5 223 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 PRSS47A8MTI9 375 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 BET1O15155 118 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 SPINT2O43291 252 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 MRPS14O60783 128 aaKnown RBP4.11□□□□□ -1.75
SVIP-202ENST00000525670 MT-ND4P03905 459 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 CRYBA1P05813 215 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 CSN2P05814 226 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 UBBP0CG47 229 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 ERP29P30040 261 aaKnown RBP4.11□□□□□ -1.75
SVIP-202ENST00000525670 IER3P46695 156 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 OR3A3P47888 321 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 ERVFC1-1P60608 527 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 HLA-DRB3P79483 266 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 MRPS15P82914 257 aaKnown RBP4.11□□□□□ -1.75
SVIP-202ENST00000525670 ARFRP1Q13795 201 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 HLA-DRB5Q30154 266 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 NHLRC3Q5JS37 347 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 C6orf183Q5T699 404 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 TPTE2P1Q5T6R2 138 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 SLC35E4Q6ICL7 350 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 CD200R1LQ6Q8B3 271 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 HEPN1Q6WQI6 88 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 GLDNQ6ZMI3 551 aaPredicted RBP4.11□□□□□ -1.75
SVIP-202ENST00000525670 C16orf82Q7Z2V1 217 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 MOB3BQ86TA1 216 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 CLVS1Q8IUQ0 354 aaPredicted RBP4.11□□□□□ -1.75
SVIP-202ENST00000525670 LYG1Q8N1E2 194 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 DRAM1Q8N682 238 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 CAPSLQ8WWF8 208 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 RPEQ96AT9 228 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 RAB3CQ96E17 227 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 YIPF6Q96EC8 236 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 CMSS1Q9BQ75 279 aaKnown RBP4.11□□□□□ -1.75
SVIP-202ENST00000525670 URM1Q9BTM9 101 aaKnown RBP4.11□□□□□ -1.75
SVIP-202ENST00000525670 FUNDC2Q9BWH2 189 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 MRPS26Q9BYN8 205 aaKnown RBP4.11□□□□□ -1.75
SVIP-202ENST00000525670 MMP28Q9H239 520 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 TAF9BQ9HBM6 251 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 SPACA1Q9HBV2 294 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 PCDHB16Q9NRJ7 776 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 C1RLQ9NZP8 487 aa4.11□□□□□ -1.75
SVIP-202ENST00000525670 NBEAL1Q6ZS30 2694 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 IGKV1D-8A0A087WSZ0 117 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 A0A087WYN8 130 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 CCDC160A6NGH7 325 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 ZNF736B4DX44 427 aaPredicted RBP4.1□□□□□ -1.75
SVIP-202ENST00000525670 C15orf65H3BRN8 121 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 J3QR06 171 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 HSD17B6O14756 317 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 TIMM23O14925 209 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 LDLRAD4O15165 306 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 HSPA12AO43301 675 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 PEX14O75381 377 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 SNRNP70P08621 437 aaKnown RBP4.1□□□□□ -1.75
SVIP-202ENST00000525670 SCTP09683 121 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms