RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 TMEM144Q7Z5S9 345 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 KRTAP11-1Q8IUC1 163 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 MIR7-3HGQ8N6C7 128 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 ZNF433Q8N7K0 673 aaPredicted RBP3.14□□□□□ -1.91
USP47-206ENST00000525367 OR2T27Q8NH04 317 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 LHFPL5Q8TAF8 219 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 PYDC1Q8WXC3 89 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 MAL2Q969L2 176 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 RNF5Q99942 180 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 C1orf50Q9BV19 199 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 PCBD2Q9H0N5 130 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 DHCR7Q9UBM7 475 aaKnown RBP3.14□□□□□ -1.91
USP47-206ENST00000525367 CELA1Q9UNI1 258 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 ANGPT4Q9Y264 503 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 PKIGQ9Y2B9 76 aa3.14□□□□□ -1.91
USP47-206ENST00000525367 ZCCHC6Q5VYS8 1495 aaKnown RBP3.14□□□□□ -1.91
USP47-206ENST00000525367 PCF11O94913 1555 aaKnown RBP3.13□□□□□ -1.91
USP47-206ENST00000525367 GTF3C1Q12789 2109 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 TNS2Q63HR2 1409 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 TMED7-TICAM2A0A0A6YYA0 188 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 IGLL5B9A064 214 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 GSTZ1O43708 216 aaPredicted RBP3.13□□□□□ -1.91
USP47-206ENST00000525367 CCNKO75909 580 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 PDYNP01213 254 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 IFNA1P01562 189 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 SERPINA7P05543 415 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 LINC00869P0C866 280 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 KCNE1P15382 129 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 HIST1H1TP22492 207 aaPredicted RBP3.13□□□□□ -1.91
USP47-206ENST00000525367 TGFBR1P36897 503 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 LINC00313P59037 77 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 ARPC4P59998 168 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 CAV1Q03135 178 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 ENDOGQ14249 297 aaKnown RBP3.13□□□□□ -1.91
USP47-206ENST00000525367 IAH1Q2TAA2 248 aaPredicted RBP3.13□□□□□ -1.91
USP47-206ENST00000525367 Q5W150 140 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 LPCAT3Q6P1A2 487 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 LRP11Q86VZ4 500 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 BAP18Q8IXM2 172 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 OR51A2Q8NGJ7 313 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 ZHX1-C8orf76Q96EF9 292 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 PYURFQ96I23 114 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 FOPNLQ96NB1 174 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 BOLA2Q9H3K6 86 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 IDI2-AS1Q9NZ38 188 aa3.13□□□□□ -1.91
USP47-206ENST00000525367 MRPL27Q9P0M9 148 aaKnown RBP3.13□□□□□ -1.91
USP47-206ENST00000525367 AHDC1Q5TGY3 1603 aaPredicted RBP3.12□□□□□ -1.91
USP47-206ENST00000525367 PLCH2O75038 1416 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 IGHV1-69-2A0A0G2JMI3 117 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 LINC00862A6NCI5 91 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 FAM159BA6NKW6 160 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 KNCNA6PVL3 124 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 ATG12O94817 140 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 APOMO95445 188 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 OPN1SWP03999 348 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 CISD3P0C7P0 127 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 ESDP10768 282 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 CCL1P22362 96 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 CD34P28906 385 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 AKR1C2P52895 323 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 HOXC5Q00444 222 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 DEFA6Q01524 100 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 OOSP2Q86WS3 158 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 SLC35F6Q8N357 371 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 OR2T4Q8NH00 348 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 RASSF5Q8WWW0 418 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 RBPMSQ93062 196 aaKnown RBP3.12□□□□□ -1.91
USP47-206ENST00000525367 CPNE2Q96FN4 548 aaPredicted RBP3.12□□□□□ -1.91
USP47-206ENST00000525367 CNBD2Q96M20 576 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 ZNF286AQ9HBT8 521 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 ANAPC10Q9UM13 185 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 ARAP3Q8WWN8 1544 aa3.12□□□□□ -1.91
USP47-206ENST00000525367 DCCP43146 1447 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 OR6C6A6NF89 314 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 A8MU10 97 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 INMT-MINDY4F8WBC2 141 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 FAAHO00519 579 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 MED6O75586 246 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 IL4P05112 153 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 OPRM1P35372 400 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 RPL5P46777 297 aaKnown RBP3.11□□□□□ -1.91
USP47-206ENST00000525367 ZNF133P52736 654 aaPredicted RBP3.11□□□□□ -1.91
USP47-206ENST00000525367 CRYBA4P53673 196 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 TAS2R41P59536 307 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 PDGFRLQ15198 375 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 TSNQ15631 228 aaKnown RBP3.11□□□□□ -1.91
USP47-206ENST00000525367 MOGQ16653 247 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 C3orf33Q6P1S2 294 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 ANKRD29Q8N6D5 301 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 SPANXA2-OT1Q8N9U9 137 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 OR13C6PQ8NH95 151 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 DYDC1Q8WWB3 177 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 C12orf43Q96C57 262 aaKnown RBP3.11□□□□□ -1.91
USP47-206ENST00000525367 IP6K3Q96PC2 410 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 TBX5Q99593 518 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 TSSK6Q9BXA6 273 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 PLA2G12AQ9BZM1 189 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 GABARAPL1Q9H0R8 117 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 CXorf21Q9HAI6 301 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms