RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 LFNGQ8NES3 379 aa8.42□□□□□ -1.06
CSMD1-210ENST00000521646 ABHD14BQ96IU4 210 aa8.42□□□□□ -1.06
CSMD1-210ENST00000521646 CLCC1Q96S66 551 aa8.42□□□□□ -1.06
CSMD1-210ENST00000521646 FAM110AQ9BQ89 295 aa8.42□□□□□ -1.06
CSMD1-210ENST00000521646 CHCHD6Q9BRQ6 235 aa8.42□□□□□ -1.06
CSMD1-210ENST00000521646 AGMATQ9BSE5 352 aa8.42□□□□□ -1.06
CSMD1-210ENST00000521646 NICN1Q9BSH3 213 aa8.42□□□□□ -1.06
CSMD1-210ENST00000521646 JPT1Q9UK76 154 aa8.42□□□□□ -1.06
CSMD1-210ENST00000521646 FOXA2Q9Y261 457 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-210ENST00000521646 LDLRAD4O15165 306 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 YPEL1O60688 119 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 OR8U9P0C7N5 309 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 PPP3R1P63098 170 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 PJVKQ0ZLH3 352 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 MRPL28Q13084 256 aaKnown RBP8.41□□□□□ -1.06
CSMD1-210ENST00000521646 C6orf183Q5T699 404 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 CD200R1LQ6Q8B3 271 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 C6orf201Q7Z4U5 140 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 JAGN1Q8N5M9 183 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 CPNE2Q96FN4 548 aaPredicted RBP8.41□□□□□ -1.06
CSMD1-210ENST00000521646 C5orf30Q96GV9 206 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 DERL3Q96Q80 235 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 YPEL2Q96QA6 119 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 HDHD3Q9BSH5 251 aaPredicted RBP8.41□□□□□ -1.06
CSMD1-210ENST00000521646 FAAP24Q9BTP7 215 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 ZMAT4Q9H898 229 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 PALMDQ9NP74 551 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 BABAM2Q9NXR7 383 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 CNOT2Q9NZN8 540 aaKnown RBP8.41□□□□□ -1.06
CSMD1-210ENST00000521646 OR1A1Q9P1Q5 309 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 FBXL7Q9UJT9 491 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 KIAA1109Q2LD37 5005 aa8.41□□□□□ -1.06
CSMD1-210ENST00000521646 IGKV1-6A0A0C4DH72 117 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 ZNF780AO75290 641 aaPredicted RBP8.4□□□□□ -1.06
CSMD1-210ENST00000521646 PDCD6O75340 191 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 CA2P00918 260 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 HSPB1P04792 205 aaKnown RBP8.4□□□□□ -1.06
CSMD1-210ENST00000521646 CD2P06729 351 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 FUT3P21217 361 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 HTR2CP28335 458 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 TPPP2P59282 170 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 HTD2P86397 168 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 UNC119Q13432 240 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 Q499Y3 187 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 ZNF660Q6AZW8 331 aaPredicted RBP8.4□□□□□ -1.06
CSMD1-210ENST00000521646 AWAT2Q6E213 333 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 ZNF880Q6PDB4 577 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 LINC00322Q6ZN03 302 aaPredicted RBP8.4□□□□□ -1.06
CSMD1-210ENST00000521646 PPP1R27Q86WC6 154 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 STX19Q8N4C7 294 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 ZNF383Q8NA42 475 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 OR6Q1Q8NGQ2 317 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 WFDC10AQ9H1F0 79 aa8.4□□□□□ -1.06
CSMD1-210ENST00000521646 RPL36Q9Y3U8 105 aaKnown RBP8.4□□□□□ -1.06
CSMD1-210ENST00000521646 HSPA12AO43301 675 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 CRTAPO75718 401 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-210ENST00000521646 NAPSAO96009 420 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 IGLV2-23P01705 113 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 QRFPP83859 136 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 PITPNAQ00169 270 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 DYRK1AQ13627 763 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 KLF5Q13887 457 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-210ENST00000521646 PSG5Q15238 335 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 TMEM30BQ3MIR4 351 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 ACTBL2Q562R1 376 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 LY6G6FQ5SQ64 297 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 UNQ5815/PRO19632Q6UWF5 114 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 OR5AN1Q8NGI8 311 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 ISOC1Q96CN7 298 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 MRPS24Q96EL2 167 aaKnown RBP8.39□□□□□ -1.07
CSMD1-210ENST00000521646 SPACA1Q9HBV2 294 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 PAK1IP1Q9NWT1 392 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-210ENST00000521646 DIMT1Q9UNQ2 313 aaKnown RBP8.39□□□□□ -1.07
CSMD1-210ENST00000521646 VPS13DQ5THJ4 4388 aa8.39□□□□□ -1.07
CSMD1-210ENST00000521646 HECTD4Q9Y4D8 3996 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 FAM90A7PA6NKC0 464 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 FAM90A23PA8MXZ1 464 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 CRYGBP07316 175 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 CSN3P07498 182 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 ARSBP15848 533 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 MECP2P51608 486 aaKnown RBP8.38□□□□□ -1.07
CSMD1-210ENST00000521646 AKIRIN2Q53H80 203 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 YIF1BQ5BJH7 314 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 LRRTM1Q86UE6 522 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 OR5T1Q8NG75 326 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 IL1F10Q8WWZ1 152 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 GGHQ92820 318 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 MRPL48Q96GC5 212 aaKnown RBP8.38□□□□□ -1.07
CSMD1-210ENST00000521646 S100A13Q99584 98 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 GFI1Q99684 422 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 HIPK2Q9H2X6 1198 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 SLC23A1Q9UHI7 598 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 RNF150Q9ULK6 438 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 ORC6Q9Y5N6 252 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 SELENOKQ9Y6D0 94 aa8.38□□□□□ -1.07
CSMD1-210ENST00000521646 RBMY1BA6NDE4 496 aaKnown RBP8.37□□□□□ -1.07
CSMD1-210ENST00000521646 RBMY1EA6NEQ0 496 aaKnown RBP8.37□□□□□ -1.07
CSMD1-210ENST00000521646 SNTNA6NMZ2 147 aa8.37□□□□□ -1.07
CSMD1-210ENST00000521646 SRRM4A7MD48 611 aaKnown RBP8.37□□□□□ -1.07
CSMD1-210ENST00000521646 FOXI3A8MTJ6 420 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms