RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 PCNPQ8WW12 178 aaKnown RBP5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 RND1Q92730 232 aa5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 CORO2AQ92828 525 aa5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 GPR146Q96CH1 333 aa5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 SNRNP40Q96DI7 357 aaKnown RBP5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 TSNAXQ99598 290 aaKnown RBP5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 MRPL37Q9BZE1 423 aaKnown RBP5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 OR2S2Q9NQN1 319 aa5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 UFSP2Q9NUQ7 469 aa5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 ASF1BQ9NVP2 202 aa5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 LUZP4Q9P127 313 aa5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 RNF150Q9ULK6 438 aa5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 KCNS2Q9ULS6 477 aa5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 CARHSP1Q9Y2V2 147 aaKnown RBP5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 CEP250Q9BV73 2442 aa5.57□□□□□ -1.52
CTNNA1-228ENST00000521640 RIF1Q5UIP0 2472 aaKnown RBP5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 A0A1B0GW64 132 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 IGSF23A1L1A6 192 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 TMEM218A2RU14 115 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 LRRC30A6NM36 301 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 ZNF729A6NN14 1252 aaPredicted RBP5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 LGALS8O00214 317 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 RAB29O14966 203 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 TXNL1O43396 289 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 SYNGR2O43760 224 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 CLDN14O95500 239 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 IGKV1-39P01597 117 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 IGKV1-5P01602 117 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 IGKV1D-39P04432 117 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 OR8U9P0C7N5 309 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 SFTPCP11686 197 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 IRF2P14316 349 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 GLIPR1P48060 266 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 CEBPDP49716 269 aaPredicted RBP5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 SULT1A1P50225 295 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 AKR1C2P52895 323 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 POLR2GP62487 172 aaKnown RBP eCLIP5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 HBG1P69891 147 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 HBG2P69892 147 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 MEF2CQ06413 473 aaPredicted RBP5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 KLRB1Q12918 225 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 EFNB3Q15768 340 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 MST1LQ2TV78 715 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 CXorf66Q5JRM2 361 aaPredicted RBP5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 PXDC1Q5TGL8 231 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 BTNL8Q6UX41 500 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 ETV3LQ6ZN32 361 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 ZNF788Q6ZQV5 615 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 MOGAT3Q86VF5 341 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 LRP11Q86VZ4 500 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 C1orf87Q8N0U7 546 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 PUSL1Q8N0Z8 303 aaKnown RBP5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 ST6GALNAC3Q8NDV1 305 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 OR13A1Q8NGR1 328 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 OR8U1Q8NH10 309 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 RNASE11Q8TAA1 199 aaKnown RBP5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 MRGPRDQ8TDS7 321 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 ITLN1Q8WWA0 313 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 ADTRPQ96IZ2 230 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 LINC00052Q96N35 136 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 CIB3Q96Q77 187 aaPredicted RBP5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 ATP5SQ99766 215 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 AGMATQ9BSE5 352 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 EGLN1Q9GZT9 426 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 OR2D2Q9H210 308 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 ZNF665Q9H7R5 613 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 HSPB7Q9UBY9 170 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 FZR1Q9UM11 496 aa5.56□□□□□ -1.52
CTNNA1-228ENST00000521640 TRGV10A0A0A0MS01 117 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 TRAV38-1A0A0B4J264 116 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 KBTBD11-OT1A0A1B0GTJ5 212 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 DPRXA6NFQ7 191 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 NKX6-3A6NJ46 265 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 C17orf100A8MU93 164 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 ABCD4O14678 606 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 SIGLEC5O15389 551 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 KCNAB3O43448 404 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 TNFSF12O43508 249 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 SPRY3O43610 288 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 CHST1O43916 411 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 SSSCA1O60232 199 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 SOX15O60248 233 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 CLDN1O95832 211 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 CA7P43166 264 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 PAX9P55771 341 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 ADIPOQQ15848 244 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 ATP6V1FQ16864 119 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 MORN2Q502X0 79 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 PDLIM3Q53GG5 364 aaPredicted RBP5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 NCMAPQ5T1S8 102 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 SVBPQ8N300 66 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 FGFRL1Q8N441 504 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 PRR18Q8N4B5 295 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 LINC01356Q8N9X3 169 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 SYT8Q8NBV8 401 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 OR52L2PQ8NGH6 319 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 SUN5Q8TC36 379 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 LRRC46Q96FV0 321 aa5.55□□□□□ -1.52
CTNNA1-228ENST00000521640 PSMG3Q9BT73 122 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms