RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 COX7A1P24310 79 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 PTBP1P26599 531 aaKnown RBP eCLIP2.81□□□□□ -1.964e-9■■■■■ 40.9
VPS13B-208ENST00000521037 PSMB9P28065 219 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 GPR183P32249 361 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 DDOSTP39656 456 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 ETV1P50549 477 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 SLC25A1P53007 311 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 XGP55808 180 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 CAV3P56539 151 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 CLDN8P56748 225 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 GNG2P59768 71 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 HIST1H3AP68431 136 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 RUNX1Q01196 453 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 TNFRSF9Q07011 255 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 OR8B8Q15620 311 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 IMPG1Q17R60 797 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 SNAI3Q3KNW1 292 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 C6orf226Q5I0X4 101 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 HIST2H3PS2Q5TEC6 136 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 FAHD1Q6P587 224 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 TBPL2Q6SJ96 375 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 WDR82Q6UXN9 313 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 HIST2H3AQ71DI3 136 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 MOB3BQ86TA1 216 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 NAA40Q86UY6 237 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 SLC30A8Q8IWU4 369 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 COMMD1Q8N668 190 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 NOXO1Q8NFA2 376 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 STXBP6Q8NFX7 210 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 OR4C5Q8NGB2 326 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 OR8U1Q8NH10 309 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 OR10A6Q8NH74 314 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 KCNG3Q8TAE7 436 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 ACOT11Q8WXI4 607 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-208ENST00000521037 PELI1Q96FA3 418 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 ZNF486Q96H40 463 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-208ENST00000521037 SLC35G5Q96KT7 338 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 C2orf48Q96LS8 159 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 Q96MT0 163 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 EPYCQ99645 322 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 ZNF426Q9BUY5 554 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 GABARAPL3Q9BY60 117 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 TLNRD1Q9H1K6 362 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 DCSTAMPQ9H295 470 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 ARMC7Q9H6L4 198 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 AUNIPQ9H7T9 357 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 REEP1Q9H902 201 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 MTHFD2LQ9H903 347 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-208ENST00000521037 FKBP14Q9NWM8 211 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 SLC2A8Q9NY64 477 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 ZNF221Q9UK13 617 aa2.81□□□□□ -1.96
VPS13B-208ENST00000521037 EXOSC1Q9Y3B2 195 aaKnown RBP2.81□□□□□ -1.96
VPS13B-208ENST00000521037 TBL2Q9Y4P3 447 aaKnown RBP2.81□□□□□ -1.96
VPS13B-208ENST00000521037 A0A0B4J2E0 115 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 A0A0J9YWU9 116 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 A0A1B0GX12 115 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 IRGMA1A4Y4 181 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 IZUMO1RA6ND01 250 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 ZNF726A6NNF4 738 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 C11orf98E9PRG8 122 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 LY6LH3BQJ8 138 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 KHDRBS3O75525 346 aaKnown RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 OR2F2O95006 317 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 SERPINA1P01009 418 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 IFNA14P01570 189 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 IGHG2P01859 326 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 SEMG1P04279 462 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 FABP3P05413 133 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 CDK1P06493 297 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 DBIP07108 87 aaKnown RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 ACAA1P09110 424 aaPredicted RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 H2BFMP0C1H6 154 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 HSMCR30P0CW71 290 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 PIPP12273 146 aaPredicted RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 GPX2P18283 190 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 PSMB8P28062 276 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 ERP29P30040 261 aaKnown RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 S100A3P33764 101 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 KDELR2P33947 212 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 GGT2P36268 569 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 YAP1P46937 504 aaKnown RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 CRYBA2P53672 197 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 MTPNP58546 118 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 CDC42P60953 191 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 RPL38P63173 70 aaKnown RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 MRPS15P82914 257 aaKnown RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 IFITM3Q01628 133 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 ZFP69Q49AA0 526 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 FAM27D1Q5T7N8 215 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 AADACL4Q5VUY2 407 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 RSBN1Q5VWQ0 802 aaPredicted RBP2.8□□□□□ -1.96
VPS13B-208ENST00000521037 MEDAGQ5VYS4 303 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 OR4F3Q6IEY1 312 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 LAIR2Q6ISS4 152 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 H2BFWTQ7Z2G1 175 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 C16orf82Q7Z2V1 217 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 HDDC2Q7Z4H3 204 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 CATSPERDQ86XM0 798 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 ZNF440Q8IYI8 595 aa2.8□□□□□ -1.96
VPS13B-208ENST00000521037 STPG2Q8N412 459 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms