RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 ARSBP15848 533 aa15.19■□□□□ 0.02
PABPC1-215ENST00000520804 CEACAM6P40199 344 aa15.19■□□□□ 0.02
PABPC1-215ENST00000520804 SLURP1P55000 103 aa15.19■□□□□ 0.02
PABPC1-215ENST00000520804 TMEM267Q0VDI3 215 aaPredicted RBP15.19■□□□□ 0.02
PABPC1-215ENST00000520804 P2RY14Q15391 338 aa15.19■□□□□ 0.02
PABPC1-215ENST00000520804 LIPKQ5VXJ0 399 aa15.19■□□□□ 0.02
PABPC1-215ENST00000520804 ABHD5Q8WTS1 349 aa15.19■□□□□ 0.02
PABPC1-215ENST00000520804 DLX4Q92988 240 aaPredicted RBP15.19■□□□□ 0.02
PABPC1-215ENST00000520804 TMEM203Q969S6 136 aa15.19■□□□□ 0.02
PABPC1-215ENST00000520804 GFI1Q99684 422 aa15.19■□□□□ 0.02
PABPC1-215ENST00000520804 PLGRKTQ9HBL7 147 aa15.19■□□□□ 0.02
PABPC1-215ENST00000520804 RNF150Q9ULK6 438 aa15.19■□□□□ 0.02
PABPC1-215ENST00000520804 HSF4Q9ULV5 492 aa15.19■□□□□ 0.02
PABPC1-215ENST00000520804 MGAT4AQ9UM21 535 aa15.19■□□□□ 0.02
PABPC1-215ENST00000520804 SLC17A2O00624 439 aa15.18■□□□□ 0.02
PABPC1-215ENST00000520804 HSPA12AO43301 675 aa15.18■□□□□ 0.02
PABPC1-215ENST00000520804 PROP1O75360 226 aa15.18■□□□□ 0.02
PABPC1-215ENST00000520804 SCTP09683 121 aa15.18■□□□□ 0.02
PABPC1-215ENST00000520804 AKIRIN2Q53H80 203 aa15.18■□□□□ 0.02
PABPC1-215ENST00000520804 PYHIN1Q6K0P9 492 aa15.18■□□□□ 0.02
PABPC1-215ENST00000520804 TMEM91Q6ZNR0 172 aa15.18■□□□□ 0.02
PABPC1-215ENST00000520804 PPP1R27Q86WC6 154 aa15.18■□□□□ 0.02
PABPC1-215ENST00000520804 PTX4Q96A99 478 aa15.18■□□□□ 0.02
PABPC1-215ENST00000520804 Q9N2K0 584 aa15.18■□□□□ 0.02
PABPC1-215ENST00000520804 C12orf4Q9NQ89 552 aa15.18■□□□□ 0.02
PABPC1-215ENST00000520804 GAB2Q9UQC2 676 aa15.18■□□□□ 0.02
PABPC1-215ENST00000520804 IGHV4OR15-8A0A075B7B6 117 aa15.17■□□□□ 0.02
PABPC1-215ENST00000520804 A0A087WW49 117 aa15.17■□□□□ 0.02
PABPC1-215ENST00000520804 SAP30O75446 220 aa15.17■□□□□ 0.02
PABPC1-215ENST00000520804 TMEM50BP56557 158 aa15.17■□□□□ 0.02
PABPC1-215ENST00000520804 TPBGQ13641 420 aa15.17■□□□□ 0.02
PABPC1-215ENST00000520804 PSG5Q15238 335 aa15.17■□□□□ 0.02
PABPC1-215ENST00000520804 ACTBL2Q562R1 376 aa15.17■□□□□ 0.02
PABPC1-215ENST00000520804 ZNF562Q6V9R5 426 aa15.17■□□□□ 0.02
PABPC1-215ENST00000520804 DRAXINQ8NBI3 349 aaPredicted RBP15.17■□□□□ 0.02
PABPC1-215ENST00000520804 FAM103A1Q9BTL3 118 aaKnown RBP15.17■□□□□ 0.02
PABPC1-215ENST00000520804 METTL1Q9UBP6 276 aaKnown RBP15.17■□□□□ 0.02
PABPC1-215ENST00000520804 AK6Q9Y3D8 172 aaKnown RBP15.17■□□□□ 0.02
PABPC1-215ENST00000520804 RPS25P62851 125 aaKnown RBP15.16■□□□□ 0.02
PABPC1-215ENST00000520804 TRAM1Q15629 374 aa15.16■□□□□ 0.02
PABPC1-215ENST00000520804 RAB11BQ15907 218 aa15.16■□□□□ 0.02
PABPC1-215ENST00000520804 UNQ5815/PRO19632Q6UWF5 114 aa15.16■□□□□ 0.02
PABPC1-215ENST00000520804 ARHGAP5-AS1Q96IT6 56 aa15.16■□□□□ 0.02
PABPC1-215ENST00000520804 CLCC1Q96S66 551 aa15.16■□□□□ 0.02
PABPC1-215ENST00000520804 ARL6IP5O75915 188 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 SPDEFO95238 335 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 CA2P00918 260 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 IGKV1-16P04430 117 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 HSPB1P04792 205 aaKnown RBP15.15■□□□□ 0.02
PABPC1-215ENST00000520804 HSMCR30P0CW71 290 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 SNRPBP14678 240 aaKnown RBP15.15■□□□□ 0.02
PABPC1-215ENST00000520804 SPNP16150 400 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 CPEP16870 476 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 VEGFCP49767 419 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 ACSM6Q6P461 480 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 ZNF383Q8NA42 475 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 LFNGQ8NES3 379 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 ARPC1AQ92747 370 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 MS4A10Q96PG2 267 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 TSNAXQ99598 290 aaKnown RBP15.15■□□□□ 0.02
PABPC1-215ENST00000520804 CMSS1Q9BQ75 279 aaKnown RBP15.15■□□□□ 0.02
PABPC1-215ENST00000520804 PECRQ9BY49 303 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 DUSP21Q9H596 190 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 ZNF221Q9UK13 617 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 TPRKBQ9Y3C4 175 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 SORL1Q92673 2214 aa15.15■□□□□ 0.02
PABPC1-215ENST00000520804 IGKV1-6A0A0C4DH72 117 aa15.14■□□□□ 0.01
PABPC1-215ENST00000520804 IGHV3-11P01762 117 aa15.14■□□□□ 0.01
PABPC1-215ENST00000520804 PSMA1P25786 263 aaKnown RBP15.14■□□□□ 0.01
PABPC1-215ENST00000520804 CD40LGP29965 261 aa15.14■□□□□ 0.01
PABPC1-215ENST00000520804 CLDN12P56749 244 aa15.14■□□□□ 0.01
PABPC1-215ENST00000520804 LINC00205P59089 165 aa15.14■□□□□ 0.01
PABPC1-215ENST00000520804 TPPP2P59282 170 aa15.14■□□□□ 0.01
PABPC1-215ENST00000520804 PDPNQ86YL7 162 aa15.14■□□□□ 0.01
PABPC1-215ENST00000520804 OR6Q1Q8NGQ2 317 aa15.14■□□□□ 0.01
PABPC1-215ENST00000520804 FLYWCH2Q96CP2 140 aaKnown RBP15.14■□□□□ 0.01
PABPC1-215ENST00000520804 RHOVQ96L33 236 aa15.14■□□□□ 0.01
PABPC1-215ENST00000520804 SLA2Q9H6Q3 261 aa15.14■□□□□ 0.01
PABPC1-215ENST00000520804 TRDCB7Z8K6 153 aa15.13■□□□□ 0.01
PABPC1-215ENST00000520804 C3orf84H3BNL1 204 aa15.13■□□□□ 0.01
PABPC1-215ENST00000520804 TFAP2AP05549 437 aa15.13■□□□□ 0.01
PABPC1-215ENST00000520804 OR8U9P0C7N5 309 aa15.13■□□□□ 0.01
PABPC1-215ENST00000520804 GP9P14770 177 aa15.13■□□□□ 0.01
PABPC1-215ENST00000520804 CALRP27797 417 aaKnown RBP15.13■□□□□ 0.01
PABPC1-215ENST00000520804 RPS16P62249 146 aaKnown RBP15.13■□□□□ 0.01
PABPC1-215ENST00000520804 MLLT11Q13015 90 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-215ENST00000520804 C2orf76Q3KRA6 126 aa15.13■□□□□ 0.01
PABPC1-215ENST00000520804 PLAC9Q5JTB6 97 aa15.13■□□□□ 0.01
PABPC1-215ENST00000520804 SBSPONQ8IVN8 264 aa15.13■□□□□ 0.01
PABPC1-215ENST00000520804 OR56B1Q8NGI3 324 aa15.13■□□□□ 0.01
PABPC1-215ENST00000520804 FAM3DQ96BQ1 224 aa15.13■□□□□ 0.01
PABPC1-215ENST00000520804 RDH8Q9NYR8 311 aa15.13■□□□□ 0.01
PABPC1-215ENST00000520804 NKX1-2Q9UD57 310 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-215ENST00000520804 LDLRAD4O15165 306 aa15.12■□□□□ 0.01
PABPC1-215ENST00000520804 RGS10O43665 173 aa15.12■□□□□ 0.01
PABPC1-215ENST00000520804 APOA2P02652 100 aa15.12■□□□□ 0.01
PABPC1-215ENST00000520804 AQP4P55087 323 aa15.12■□□□□ 0.01
PABPC1-215ENST00000520804 PITPNAQ00169 270 aa15.12■□□□□ 0.01
PABPC1-215ENST00000520804 ANKRD65E5RJM6 399 aa15.11■□□□□ 0.01
PABPC1-215ENST00000520804 M0R1X1 148 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms