RNA–Protein interactions for RNA: ENST00000520143.1

IGHV3-57-201, Transcript of immunoglobulin heavy variable 3-57 (pseudogene), humanhuman

BASIC

Gene IGHV3-57, Length 280 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-57-201ENST00000520143 CLN8Q9UBY8 286 aa5.51□□□□□ -1.53
IGHV3-57-201ENST00000520143 RNF150Q9ULK6 438 aa5.51□□□□□ -1.53
IGHV3-57-201ENST00000520143 LAMP3Q9UQV4 416 aa5.51□□□□□ -1.53
IGHV3-57-201ENST00000520143 RCL1Q9Y2P8 373 aaKnown RBP5.51□□□□□ -1.53
IGHV3-57-201ENST00000520143 NBASA2RRP1 2371 aa5.51□□□□□ -1.53
IGHV3-57-201ENST00000520143 IGHV3-43A0A0B4J1X8 118 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 hADV38S2A0JD32 116 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 MED19A0JLT2 244 aaPredicted RBP5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 DEFB108AA8MXU0 73 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 FAM90A26D6RGX4 464 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 WRBO00258 174 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 FGF16O43320 207 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 KCNAB3O43448 404 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 JTBO76095 146 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 CLDN1O95832 211 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 PLAUP00749 431 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 IGKV1-39P01597 117 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 IGKV1D-39P04432 117 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 H2AFB1P0C5Y9 115 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 IGHV3-43DP0DP04 118 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 SELLP14151 372 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 ZNF16P17020 682 aaPredicted RBP5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 LPAR6P43657 344 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 GPR12P47775 334 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 PPOXP50336 477 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 ARHGDIBP52566 201 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 TMEM33P57088 247 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 RPL30P62888 115 aaKnown RBP5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 VAMP2P63027 116 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 COMMD7Q86VX2 200 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 TGIF2LYQ8IUE0 185 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 ZCCHC24Q8N2G6 241 aaKnown RBP5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 MUC15Q8N387 334 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 OR2C3Q8N628 320 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 FAM216BQ8N7L0 139 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 GALNT11Q8NCW6 608 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 RNASE11Q8TAA1 199 aaKnown RBP5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 CD300LFQ8TDQ1 290 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 TCTEX1D2Q8WW35 142 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 FAM122AQ96E09 287 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 C5orf30Q96GV9 206 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 SLC25A31Q9H0C2 315 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 MRPL18Q9H0U6 180 aaKnown RBP5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 ARV1Q9H2C2 271 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 SDHAF2Q9NX18 166 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 DCAF16Q9NXF7 216 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 IDI2-AS1Q9NZ38 188 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 KAAG1Q9UBP8 84 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 SLC25A10Q9UBX3 287 aaPredicted RBP5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 FBXL17Q9UF56 701 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 PFDN2Q9UHV9 154 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 PSG11Q9UQ72 335 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 MMP24Q9Y5R2 645 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 LINC00312Q9Y6C7 94 aa5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 TPRP12270 2363 aaKnown RBP5.5□□□□□ -1.53
IGHV3-57-201ENST00000520143 ABCA4P78363 2273 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 BORCS7-ASMTA0A0B4J1R7 106 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 IGHV1-69-2A0A0G2JMI3 117 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 A0A0G2JRQ6 117 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 KIAA1324LA8MWY0 1029 aaPredicted RBP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 TOR1AO14656 332 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 RAB29O14966 203 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 TMPRSS2O15393 492 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 RBFOX2O43251 390 aaKnown RBP eCLIP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 NDUFB3O43676 98 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 CLDN14O95500 239 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 IGKV1-5P01602 117 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 P0C879 139 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 DUTP33316 252 aaKnown RBP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 KIR2DS2P43631 304 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 AKR1C2P52895 323 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 TAS2R30P59541 319 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 POLR2GP62487 172 aaKnown RBP eCLIP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 BAXQ07812 192 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 CDSNQ15517 529 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 Q3ZCU0 254 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 CXorf66Q5JRM2 361 aaPredicted RBP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 RPL7L1Q6DKI1 246 aaKnown RBP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 FAM53AQ6NSI3 398 aaPredicted RBP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 DUX4L9Q6RFH8 374 aaPredicted RBP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 SPAG16Q8N0X2 631 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 FGFRL1Q8N441 504 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 EIF4E3Q8N5X7 224 aaKnown RBP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 UBAC2Q8NBM4 344 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 PCNPQ8WW12 178 aaKnown RBP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 CCL17Q92583 94 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 CITED4Q96RK1 184 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 RAB40CQ96S21 281 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 SSBP4Q9BWG4 385 aaPredicted RBP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 IFI27L2Q9H2X8 130 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 GAL3ST2Q9H3Q3 398 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 LYRM2Q9NU23 88 aaPredicted RBP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 CACNG5Q9UF02 275 aa5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 SPTBN1Q01082 2364 aaKnown RBP5.49□□□□□ -1.53
IGHV3-57-201ENST00000520143 PKD1L2Q7Z442 2459 aa5.48□□□□□ -1.53
IGHV3-57-201ENST00000520143 FAM24AA6NFZ4 105 aa5.48□□□□□ -1.53
IGHV3-57-201ENST00000520143 FAM90A9PA6NNJ1 464 aa5.48□□□□□ -1.53
IGHV3-57-201ENST00000520143 LINC00473A8K010 186 aa5.48□□□□□ -1.53
IGHV3-57-201ENST00000520143 C17orf98A8MV24 154 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms