RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 DGCR6Q14129 220 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 GK3PQ14409 553 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 LRRC23Q53EV4 343 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 FAM222AQ5U5X8 452 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 LPCAT4Q643R3 524 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 C8orf82Q6P1X6 216 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 RRM2BQ7LG56 351 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 SCXQ7RTU7 201 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 NECAP1Q8NC96 275 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 BBS1Q8NFJ9 593 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 OR5D18Q8NGL1 313 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 CNIH3Q8TBE1 160 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 C10orf35Q96D05 121 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 BORCS8Q96FH0 119 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 CCDC167Q9P0B6 97 aa4.56□□□□□ -1.68
CTNNA1-216ENST00000519489 IGHV3OR16-8A0A075B7F1 116 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 IGLV5-52A0A0A0MRZ9 124 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 SLC22A1O15245 554 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 SULT1B1O43704 296 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 DIRAS1O95057 198 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 ALOX5APP20292 161 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 GZMHP20718 246 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 CCL1P22362 96 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 CCL18P55774 89 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 MORN2Q502X0 79 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 RPL39P5Q59GN2 51 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 RNASE12Q5GAN4 147 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 ATAD3CQ5T2N8 411 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 METTL21CQ5VZV1 264 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 OR4A47Q6IF82 309 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 PLEKHG7Q6ZR37 379 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 SHFQ7M4L6 423 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 ELMOD2Q8IZ81 293 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 IQCF1Q8N6M8 205 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 OR52L2PQ8NGH6 319 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 STON2Q8WXE9 905 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 NR1H4Q96RI1 486 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 RNF2Q99496 336 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 NIPSNAP3BQ9BS92 247 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 TTTY10Q9BZA0 68 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 TSPYL1Q9H0U9 437 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 ANKRD19PQ9H560 264 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 TMEM14BQ9NUH8 114 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 FAM118AQ9NWS6 357 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 GNG12Q9UBI6 72 aa4.55□□□□□ -1.68
CTNNA1-216ENST00000519489 IGKV3-7A0A075B6H7 116 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 ZNF207O43670 478 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 ORC5O43913 435 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 APOL3O95236 402 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 HBZP02008 142 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 MT-ND4P03905 459 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 REG1AP05451 166 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 H1F0P07305 194 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 GALP22466 123 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 PPP1CCP36873 323 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 GSSP48637 474 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 RBP2P50120 134 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 MTCP1P56278 107 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 DEFB131AP59861 70 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 HTD2P86397 168 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 SERPINA12Q8IW75 414 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 GBGT1Q8N5D6 347 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 OR5AN1Q8NGI8 311 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 ASB9Q96DX5 294 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 TMEM68Q96MH6 324 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 ALG8Q9BVK2 526 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 IFI27L2Q9H2X8 130 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 PFDN2Q9UHV9 154 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 SNX5Q9Y5X3 404 aa4.54□□□□□ -1.68
CTNNA1-216ENST00000519489 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 DHRS7CA6NNS2 312 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 KNCNA6PVL3 124 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 RS1O15537 224 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 MRPS14O60783 128 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 SOX14O95416 240 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 C1QBP02746 253 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 MAGEA2P43356 314 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 OXA1LQ15070 435 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 PTGES3Q15185 160 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 ESRGQ1W209 222 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 ODF4Q2M2E3 257 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 PIGYQ3MUY2 71 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 FAM209BQ5JX69 171 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 LIPKQ5VXJ0 399 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 FAM90A2PQ658T7 463 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 LAMTOR1Q6IAA8 161 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 ZNF497Q6ZNH5 498 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 SSX9Q7RTT3 188 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 SUMF2Q8NBJ7 301 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 GIMAP1Q8WWP7 306 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 TMEM190Q8WZ59 177 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 ADAT3Q96EY9 351 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 UPK3BQ9BT76 320 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 ABHD14AQ9BUJ0 271 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 ZNF436Q9C0F3 470 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 NDUFAF4Q9P032 175 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 ING4Q9UNL4 249 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 EXOSC1Q9Y3B2 195 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 ENPP4Q9Y6X5 453 aa4.53□□□□□ -1.68
CTNNA1-216ENST00000519489 MFSD2BA6NFX1 497 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms