RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 RPS27AP62979 156 aaKnown RBP7.41□□□□□ -1.22
HDAC3-215ENST00000519474 FABP5Q01469 135 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 MLLT11Q13015 90 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-215ENST00000519474 UNC119Q13432 240 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 ARSJQ5FYB0 599 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-215ENST00000519474 PLAC9Q5JTB6 97 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 RBM48Q5RL73 367 aaKnown RBP7.41□□□□□ -1.22
HDAC3-215ENST00000519474 IZUMO2Q6UXV1 221 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 C6orf201Q7Z4U5 140 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 MOB3BQ86TA1 216 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 FAM89BQ8N5H3 189 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 OR52L2PQ8NGH6 319 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 MRPL30Q8TCC3 161 aaKnown RBP7.41□□□□□ -1.22
HDAC3-215ENST00000519474 EAF1Q96JC9 268 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-215ENST00000519474 CNBD2Q96M20 576 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 NEDD4LQ96PU5 975 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 NICN1Q9BSH3 213 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 KCNK15Q9H427 330 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 PLSCR3Q9NRY6 295 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 MGAM2Q2M2H8 2515 aa7.41□□□□□ -1.22
HDAC3-215ENST00000519474 G3V4G9 280 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 HSD17B6O14756 317 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 NUPL2O15504 423 aaKnown RBP7.4□□□□□ -1.22
HDAC3-215ENST00000519474 SOCS1O15524 211 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 YPEL1O60688 119 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 IGKV1D-33P01593 117 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 IGKV1-33P01594 117 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 S100A8P05109 93 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 CRYGCP07315 174 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 CD1BP29016 333 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 BLVRBP30043 206 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-215ENST00000519474 ZNF137PP52743 207 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 CEBPGP53567 150 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 HES1Q14469 280 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 OXA1LQ15070 435 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 TRAM1Q15629 374 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 C9orf152Q5JTZ5 239 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 ZNF880Q6PDB4 577 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 TRAT1Q6PIZ9 186 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 Q6ZPA2 131 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 ODF3L1Q8IXM7 274 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 Q8N6K4 173 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 C5orf56Q8N8D9 126 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 WFDC9Q8NEX5 89 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 OR10V1Q8NGI7 309 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 RTN4IP1Q8WWV3 396 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-215ENST00000519474 DPF1Q92782 380 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 R3HDM4Q96D70 268 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 YPEL2Q96QA6 119 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 CITED4Q96RK1 184 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 CST11Q9H112 138 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 LPAR5Q9H1C0 372 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 OR2S2Q9NQN1 319 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 GNG12Q9UBI6 72 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 RAB26Q9ULW5 256 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 MOB4Q9Y3A3 225 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 NUBP2Q9Y5Y2 271 aa7.4□□□□□ -1.22
HDAC3-215ENST00000519474 PLXNB1O43157 2135 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 TCRBV4S1A1TA0A5B7 111 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 CCDC160A6NGH7 325 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 FOXI3A8MTJ6 420 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-215ENST00000519474 SLC17A2O00624 439 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 FGF16O43320 207 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 NAPSAO96009 420 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 IGHG2P01859 326 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 FCER2P06734 321 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 F2RL1P55085 397 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 SSX1Q16384 188 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 BEAN1Q3B7T3 259 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 NKAPLQ5M9Q1 402 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 LY6G6FQ5SQ64 297 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 SAMD5Q5TGI4 173 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 ZNF329Q86UD4 541 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 Q8N9W7 124 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 OR51D1Q8NGF3 324 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 OR6M1Q8NGM8 313 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 OR2T10Q8NGZ9 312 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 CD300LFQ8TDQ1 290 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 NOL4LQ96MY1 436 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-215ENST00000519474 TMEM59Q9BXS4 323 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 MRPS26Q9BYN8 205 aaKnown RBP7.39□□□□□ -1.23
HDAC3-215ENST00000519474 RAB9BQ9NP90 201 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 ACOT13Q9NPJ3 140 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 GSN-AS1Q9NRJ2 163 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 KCNIP1Q9NZI2 227 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 LINC00527Q9UJ94 153 aa7.39□□□□□ -1.23
HDAC3-215ENST00000519474 RBMX2Q9Y388 322 aaKnown RBP7.39□□□□□ -1.23
HDAC3-215ENST00000519474 A0A1W2PRX2 142 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 SHISA3A0PJX4 238 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 LDLRAD4O15165 306 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 LANCL1O43813 399 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 ARL6IP5O75915 188 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 CD3GP09693 182 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 H2AFB2P0C5Z0 115 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 LINC00614P0C842 121 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 ARSBP15848 533 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 PSMA1P25786 263 aaKnown RBP7.38□□□□□ -1.23
HDAC3-215ENST00000519474 PPP1CCP36873 323 aaKnown RBP7.38□□□□□ -1.23
HDAC3-215ENST00000519474 CLDN12P56749 244 aa7.38□□□□□ -1.23
HDAC3-215ENST00000519474 PLA2G7Q13093 441 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms