RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CKLFQ9UBR5 152 aa2.26□□□□□ -2.05
SKP1-204ENST00000517691 A0A096LNT2 108 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 TRAV38-1A0A0B4J264 116 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 PQLC2LA1A4F0 135 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 OR5B21A6NL26 309 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 DHRS7CA6NNS2 312 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 B4DSR2 109 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 K7EN84 100 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 MGST3O14880 152 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 PHF1O43189 567 aaPredicted RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 CD5LO43866 347 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 CYB5AP00167 134 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 LALBAP00709 142 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 IGHV2-5P01817 119 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 CD2P06729 351 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ATF1P18846 271 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 RAB3AP20336 220 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 RPL13AP40429 203 aaKnown RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 MDH2P40926 338 aaKnown RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 RBP2P50120 134 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 XGP55808 180 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 LMO4P61968 165 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 PPP3R1P63098 170 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 SLC35A2P78381 396 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 CX3CL1P78423 397 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 CDK5R1Q15078 307 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ZNF181Q2M3W8 571 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 LRRC37A5PQ49AS3 106 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 TMEM155Q4W5P6 130 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 TMEM42Q69YG0 159 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 STEAP1BQ6NZ63 245 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 LYPD2Q6UXB3 125 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 WDR82Q6UXN9 313 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 SLC25A26Q70HW3 274 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 PRSS48Q7RTY5 328 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 S100A7AQ86SG5 101 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 C11orf53Q8IXP5 236 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 MKXQ8IYA7 352 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 LINC00518Q8N0U6 118 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ZFP82Q8N141 532 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 Q8N1X5 172 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 TEX45Q8NA69 505 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 OR8B3Q8NGG8 313 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 OR51F2Q8NH61 342 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 HPSE2Q8WWQ2 592 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 AQP3Q92482 292 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 UFD1Q92890 307 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 TMEM203Q969S6 136 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 TMEM106AQ96A25 262 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 SMIM19Q96E16 107 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 SEH1LQ96EE3 360 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ZNF488Q96MN9 340 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 SPACA5Q96QH8 159 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 OR5M11Q96RB7 305 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 OR8B2Q96RD0 313 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 GPER1Q99527 375 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 CCL13Q99616 98 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ATP5SQ99766 215 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 TMED9Q9BVK6 235 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 YTHDF1Q9BYJ9 559 aaKnown RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 CHST5Q9GZS9 411 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 FGF23Q9GZV9 251 aaPredicted RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 WDR13Q9H1Z4 485 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 PPA2Q9H2U2 334 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 DUSP21Q9H596 190 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ELL3Q9HB65 397 aaPredicted RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 RETNQ9HD89 108 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ABCB10Q9NRK6 738 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 TAS2R4Q9NYW5 299 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 GHRLQ9UBU3 117 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 KIF25Q9UIL4 384 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ING4Q9UNL4 249 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 PEX16Q9Y5Y5 336 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 DSCAMO60469 2012 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 HEATR1Q9H583 2144 aaKnown RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 IGKV1-9A0A0C4DH69 117 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 NKX6-3A6NJ46 265 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 CEACAM18A8MTB9 384 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 INAFM1C9JVW0 142 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 TRAPPC2LH3BP13 241 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 J3QT63 122 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 NDUFA2O43678 99 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 SYNGR1O43759 233 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 FOXH1O75593 365 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 ATP5LO75964 103 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 LHBP01229 141 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 TFF1P04155 84 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 MAS1P04201 325 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 MSMBP08118 114 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 WNT2P09544 360 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 MUC1P15941 1255 aaPredicted RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 FLNAP21333 2647 aaKnown RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 PSMB9P28065 219 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 TGFBR2P37173 567 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 OR3A3P47888 321 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 CEBPGP53567 150 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 SEC61A1P61619 476 aaKnown RBP2.25□□□□□ -2.05
SKP1-204ENST00000517691 GNB2P62879 340 aa2.25□□□□□ -2.05
SKP1-204ENST00000517691 DHODHQ02127 395 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms