RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 WFDC9Q8NEX5 89 aa11.07□□□□□ -0.64
PDGFRB-202ENST00000517488 NPBQ8NG41 125 aa11.07□□□□□ -0.64
PDGFRB-202ENST00000517488 OR5AN1Q8NGI8 311 aa11.07□□□□□ -0.64
PDGFRB-202ENST00000517488 YIPF6Q96EC8 236 aa11.07□□□□□ -0.64
PDGFRB-202ENST00000517488 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.07□□□□□ -0.64
PDGFRB-202ENST00000517488 RHBDL2Q9NX52 303 aa11.07□□□□□ -0.64
PDGFRB-202ENST00000517488 ZNF221Q9UK13 617 aa11.07□□□□□ -0.64
PDGFRB-202ENST00000517488 TMEM235A6NFC5 223 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 OR5H14A6NHG9 310 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 NDUFA3O95167 84 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 IGF1P05019 195 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 OR8U9P0C7N5 309 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 DTYMKP23919 212 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 CFHR3Q02985 330 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 ARL6IP1Q15041 203 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 SRSF7Q16629 238 aaKnown RBP eCLIP11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 KPRPQ5T749 579 aaPredicted RBP11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 LIN54Q6MZP7 749 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 TEX38Q6PEX7 206 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 Q6ZS49 121 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 COMMD1Q8N668 190 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 OR8U1Q8NH10 309 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 OR10J5Q8NHC4 309 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 NUDCD2Q8WVJ2 157 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 SLC25A38Q96DW6 304 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 ST6GALNAC5Q9BVH7 336 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 FBXL15Q9H469 300 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 ZFP57Q9NU63 452 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 WASHC3Q9Y3C0 194 aa11.06□□□□□ -0.64
PDGFRB-202ENST00000517488 IGHV7-81A0A0B4J1V7 117 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 H7C2Y5 167 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 M0R1X1 148 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 RRP9O43818 475 aaKnown RBP11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 SSX5O60225 188 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 DIRAS3O95661 229 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 HLA-DRB1P01911 266 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 PF4P02776 101 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 RPLP1P05386 114 aaKnown RBP11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 GSTP1P09211 210 aaKnown RBP11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 VDAC1P21796 283 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 MC5RP33032 325 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 LSM3P62310 102 aaKnown RBP11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 ZNF260Q3ZCT1 412 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 ETV3LQ6ZN32 361 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 C8orf86Q6ZUL3 223 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 C5orf30Q96GV9 206 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 GON7Q9BXV9 100 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 OR2D2Q9H210 308 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 OR51J1Q9H342 316 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 VCX3AQ9NNX9 186 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 KIAA1456Q9P272 454 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 WSB1Q9Y6I7 421 aa11.05□□□□□ -0.64
PDGFRB-202ENST00000517488 TRIM64CA6NLI5 447 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 NUDT19A8MXV4 375 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 G3V318 75 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 FCN1O00602 326 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 RRHO14718 337 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 ATP6V0E1O15342 81 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 PLXNB1O43157 2135 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 AIREO43918 545 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 SCGNO76038 276 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 PRB2P02812 416 aaPredicted RBP11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 IGKV1-16P04430 117 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 TFAP2AP05549 437 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 IGLL1P15814 213 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 CD33P20138 364 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 NDPQ00604 133 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 FOXE3Q13461 319 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 TIMM50Q3ZCQ8 353 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 H1FOOQ8IZA3 346 aaPredicted RBP11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 RNF152Q8N8N0 203 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 KLHL30-AS1Q8NEE0 82 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 GINS4Q9BRT9 223 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 PARP11Q9NR21 331 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 SDHAF2Q9NX18 166 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 ZNF580Q9UK33 172 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 GAB2Q9UQC2 676 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 ETV7Q9Y603 341 aa11.04□□□□□ -0.64
PDGFRB-202ENST00000517488 TRAV18A0A075B6X5 111 aa11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 RBBP9O75884 186 aa11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 IGHG4P01861 327 aa11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 ELANEP08246 267 aa11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 RPS19P39019 145 aaKnown RBP11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 SCAND1P57086 179 aa11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 GNG2P59768 71 aa11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 CXorf66Q5JRM2 361 aaPredicted RBP11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 ZNF695Q8IW36 515 aa11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 MRPL41Q8IXM3 137 aaKnown RBP11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 LINC00482Q8N8I6 264 aa11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 RNF5Q99942 180 aa11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 DCSTAMPQ9H295 470 aa11.03□□□□□ -0.64
PDGFRB-202ENST00000517488 J3QRK9 145 aa11.02□□□□□ -0.65
PDGFRB-202ENST00000517488 APOA2P02652 100 aa11.02□□□□□ -0.65
PDGFRB-202ENST00000517488 PSMB8P28062 276 aa11.02□□□□□ -0.65
PDGFRB-202ENST00000517488 PPIFP30405 207 aaKnown RBP11.02□□□□□ -0.65
PDGFRB-202ENST00000517488 THBS3P49746 956 aa11.02□□□□□ -0.65
PDGFRB-202ENST00000517488 RPS16P62249 146 aaKnown RBP11.02□□□□□ -0.65
PDGFRB-202ENST00000517488 CX3CL1P78423 397 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms