RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 MRPL19P49406 292 aaKnown RBP-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 XRCC4Q13426 336 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 RAB31Q13636 194 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 CEACAM16Q2WEN9 425 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 ACSM3Q53FZ2 586 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 IDNKQ5T6J7 187 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 EPGNQ6UW88 154 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 TMEM107Q6UX40 140 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 SETD3Q86TU7 594 aaPredicted RBP-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 OR7G2Q8NG99 324 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 ITFG1Q8TB96 612 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 PIH1D2Q8WWB5 315 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 SLC25A31Q9H0C2 315 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 C12orf4Q9NQ89 552 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 MCUBQ9NWR8 336 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 DDIT4Q9NX09 232 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 MOSPD1Q9UJG1 213 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 CFAP45Q9UL16 551 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 CHD5Q8TDI0 1954 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 F5P12259 2224 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 HUS1O60921 280 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 NDUFB2O95178 105 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 MYL2P10916 166 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 MX1P20591 662 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 CA5AP35218 305 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 STC1P52823 247 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 CLDN18P56856 261 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 RAB25P57735 213 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 RAB2AP61019 212 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 RHOAP61586 193 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 HSDL1Q3SXM5 330 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 RPP25LQ8N5L8 163 aaKnown RBP-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 RPS4Y2Q8TD47 263 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 NXF2Q9GZY0 626 aaKnown RBP-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 HPF1Q9NWY4 346 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 RYR2Q92736 4967 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 MUC17Q685J3 4493 aa-2.7□□□□□ -2.84
SNORA40.13-201ENST00000516379 C2CD3Q4AC94 2353 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 DNAH3Q8TD57 4116 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 A0A0J9YW62 118 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 FAM240AA0A1B0GVK7 77 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 LINC00862A6NCI5 91 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 KRT87PA6NCN2 255 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 HMGB1P1B2RPK0 211 aaPredicted RBP-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 H3BT86 120 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 KCNK1O00180 336 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 RAB14P61106 215 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 MAPK14Q16539 360 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 MIAQ16674 131 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 RNASEKQ6P5S7 137 aaKnown RBP-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 SLC30A7Q8NEW0 376 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 MITD1Q8WV92 249 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 NELFBQ8WX92 580 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 GALMQ96C23 342 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 ERMAPQ96PL5 475 aaPredicted RBP-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 TTTY13Q9BZ97 58 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 TMEM14CQ9P0S9 112 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 MRPS7Q9Y2R9 242 aaKnown RBP-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 MAP3K19Q56UN5 1328 aa-2.71□□□□□ -2.84
SNORA40.13-201ENST00000516379 ABCC9O60706 1549 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 TRAV25A0A0B4J276 109 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 FUOMA2VDF0 154 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 TLCD2A6NGC4 264 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 PRPSAP2O60256 369 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 OPRM1P35372 400 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 MP68P56378 58 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 BPIFB3P59826 476 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 GTF2BQ00403 316 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 TMEM31Q5JXX7 168 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 IBA57Q5T440 356 aaKnown RBP-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 AMTNQ6UX39 209 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 SPATA12Q7Z6I5 190 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 LINC00311Q8N616 119 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 C1orf21Q9H246 121 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 RAB20Q9NX57 234 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 BAIAP2Q9UQB8 552 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 LAMC3Q9Y6N6 1575 aa-2.72□□□□□ -2.84
SNORA40.13-201ENST00000516379 ATP8B3O60423 1300 aa-2.72□□□□□ -2.85
SNORA40.13-201ENST00000516379 CCDC88AQ3V6T2 1871 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 PKHD1L1Q86WI1 4243 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 B4DEV8 164 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 ZNF736B4DX44 427 aaPredicted RBP-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 H3BSA7 217 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 UBE2L6O14933 153 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 FGF16O43320 207 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 CREBL2O60519 120 aaPredicted RBP-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 SHOX2O60902 331 aaPredicted RBP-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 PSMA1P25786 263 aaKnown RBP-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 HSPA13P48723 471 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 PAFAH1B2P68402 229 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 CCDC152Q4G0S7 254 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 C9orf64Q5T6V5 341 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 SYT6Q5T7P8 510 aaPredicted RBP-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 NELFCDQ8IXH7 590 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 C10orf67Q8IYJ2 551 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 TEX9Q8N6V9 391 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 GATD1Q8NB37 220 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 ITFG2Q969R8 447 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 CHP1Q99653 195 aa-2.73□□□□□ -2.85
SNORA40.13-201ENST00000516379 COA1Q9GZY4 146 aa-2.73□□□□□ -2.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms